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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400016535 Potato cytosol 79.61 90.19
Solyc07g017290.2.1 Tomato cytosol 84.92 86.61
CDY00682 Canola cytosol 14.8 44.54
KRH74139 Soybean cytosol 42.18 43.52
CDY00956 Canola cytosol 38.55 42.46
Bra001369.1-P Field mustard plasma membrane 38.83 42.12
Bra029853.1-P Field mustard cytosol 37.99 41.85
VIT_07s0130g00080.t01 Wine grape cytosol 45.25 41.65
CDX73917 Canola plasma membrane 38.27 41.52
KRH49075 Soybean cytosol 42.18 41.37
GSMUA_Achr5P05040_001 Banana cytosol, extracellular 42.46 41.3
CDY08590 Canola cytosol 37.15 41.05
AT3G10572.1 Thale cress cytosol 37.15 39.94
CDY00683 Canola cytosol 17.04 38.85
Zm00001d014696_P002 Maize cytosol 33.8 33.8
TraesCS7A01G416200.1 Wheat cytosol 32.68 32.41
TraesCS7B01G316200.1 Wheat cytosol 32.68 32.41
TraesCS7D01G409500.1 Wheat cytosol 32.68 32.41
Os06t0702800-01 Rice cytosol 32.4 31.78
EER88914 Sorghum cytosol 31.84 31.67
HORVU7Hr1G096480.4 Barley plastid 32.68 24.22
Protein Annotations
EnsemblPlants:Solyc12g017470.1.1EnsemblPlantsGene:Solyc12g017470.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006810
GO:GO:0008150GO:GO:0015919GO:GO:0016020GO:GO:0016021InterPro:APEM9PANTHER:PTHR36361
TMHMM:TMhelixUniParc:UPI0002769411UniProt:K4DD80MapMan:23.4.1.5.2::
Description
No Description!
Coordinates
chr12:+:6737184..6744170
Molecular Weight (calculated)
40401.7 Da
IEP (calculated)
5.020
GRAVY (calculated)
-0.071
Length
358 amino acids
Sequence
(BLAST)
001: MAMEVAPSFP TWEEIELAEN YMVCCMYQEA AALSSSIIEQ LVDKNVKTNE PNCEFGDMLE SAAMILMQSC KASERTSEIL KQLKVLFGSV TAIPAQVFLT
101: GVCLQIPDGP SAEVQEILEE FLMKWRYVDG KYYTVASMEA DVPYVEEFSN QISLGVDKYL EIIELYVITF LGRILGNFDL AISWVEKSPL PEEKRQDLLR
201: RLHSMNTLKL GSSLQSSALP LQIDECTTDS SSLVEEKSCN GTTNILEHRD QSKGENTTKQ SILDFSRRRT PFWWFRTVTL KFGSSRLVLS NGSIFLGFLV
301: ALVYYIARRK QASLWSIVKR QASSTKKALV DFWQLAFSYQ VNPLAAVQPL PPATRGSR
Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)
001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT
Arabidopsis Description
APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.