Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400016535 | Potato | cytosol | 79.61 | 90.19 |
Solyc07g017290.2.1 | Tomato | cytosol | 84.92 | 86.61 |
CDY00682 | Canola | cytosol | 14.8 | 44.54 |
KRH74139 | Soybean | cytosol | 42.18 | 43.52 |
CDY00956 | Canola | cytosol | 38.55 | 42.46 |
Bra001369.1-P | Field mustard | plasma membrane | 38.83 | 42.12 |
Bra029853.1-P | Field mustard | cytosol | 37.99 | 41.85 |
VIT_07s0130g00080.t01 | Wine grape | cytosol | 45.25 | 41.65 |
CDX73917 | Canola | plasma membrane | 38.27 | 41.52 |
KRH49075 | Soybean | cytosol | 42.18 | 41.37 |
GSMUA_Achr5P05040_001 | Banana | cytosol, extracellular | 42.46 | 41.3 |
CDY08590 | Canola | cytosol | 37.15 | 41.05 |
AT3G10572.1 | Thale cress | cytosol | 37.15 | 39.94 |
CDY00683 | Canola | cytosol | 17.04 | 38.85 |
Zm00001d014696_P002 | Maize | cytosol | 33.8 | 33.8 |
TraesCS7A01G416200.1 | Wheat | cytosol | 32.68 | 32.41 |
TraesCS7B01G316200.1 | Wheat | cytosol | 32.68 | 32.41 |
TraesCS7D01G409500.1 | Wheat | cytosol | 32.68 | 32.41 |
Os06t0702800-01 | Rice | cytosol | 32.4 | 31.78 |
EER88914 | Sorghum | cytosol | 31.84 | 31.67 |
HORVU7Hr1G096480.4 | Barley | plastid | 32.68 | 24.22 |
Protein Annotations
EnsemblPlants:Solyc12g017470.1.1 | EnsemblPlantsGene:Solyc12g017470.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 |
GO:GO:0008150 | GO:GO:0015919 | GO:GO:0016020 | GO:GO:0016021 | InterPro:APEM9 | PANTHER:PTHR36361 |
TMHMM:TMhelix | UniParc:UPI0002769411 | UniProt:K4DD80 | MapMan:23.4.1.5.2 | : | : |
Description
No Description!
Coordinates
chr12:+:6737184..6744170
Molecular Weight (calculated)
40401.7 Da
IEP (calculated)
5.020
GRAVY (calculated)
-0.071
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEVAPSFP TWEEIELAEN YMVCCMYQEA AALSSSIIEQ LVDKNVKTNE PNCEFGDMLE SAAMILMQSC KASERTSEIL KQLKVLFGSV TAIPAQVFLT
101: GVCLQIPDGP SAEVQEILEE FLMKWRYVDG KYYTVASMEA DVPYVEEFSN QISLGVDKYL EIIELYVITF LGRILGNFDL AISWVEKSPL PEEKRQDLLR
201: RLHSMNTLKL GSSLQSSALP LQIDECTTDS SSLVEEKSCN GTTNILEHRD QSKGENTTKQ SILDFSRRRT PFWWFRTVTL KFGSSRLVLS NGSIFLGFLV
301: ALVYYIARRK QASLWSIVKR QASSTKKALV DFWQLAFSYQ VNPLAAVQPL PPATRGSR
101: GVCLQIPDGP SAEVQEILEE FLMKWRYVDG KYYTVASMEA DVPYVEEFSN QISLGVDKYL EIIELYVITF LGRILGNFDL AISWVEKSPL PEEKRQDLLR
201: RLHSMNTLKL GSSLQSSALP LQIDECTTDS SSLVEEKSCN GTTNILEHRD QSKGENTTKQ SILDFSRRRT PFWWFRTVTL KFGSSRLVLS NGSIFLGFLV
301: ALVYYIARRK QASLWSIVKR QASSTKKALV DFWQLAFSYQ VNPLAAVQPL PPATRGSR
001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT
Arabidopsis Description
APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.