CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49075	Soybean	cytosol	87.03	82.74
CDY00682	Canola	cytosol	14.99	43.7
VIT_07s0130g00080.t01	Wine grape	cytosol	48.13	42.93
Solyc07g017290.2.1	Tomato	cytosol	42.94	42.45
Solyc12g017470.1.1	Tomato	cytosol	43.52	42.18
CDY00683	Canola	cytosol	19.02	42.04
Bra029853.1-P	Field mustard	cytosol	38.62	41.23
CDY00956	Canola	cytosol	38.62	41.23
Bra001369.1-P	Field mustard	plasma membrane	39.19	41.21
AT3G10572.1	Thale cress	cytosol	39.19	40.84
CDY08590	Canola	cytosol	37.75	40.43
CDX73917	Canola	plasma membrane	37.46	39.39
PGSC0003DMT400016535	Potato	cytosol	34.58	37.97
PGSC0003DMT400024738	Potato	mitochondrion	18.44	37.21
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	38.04	35.87
EER88914	Sorghum	cytosol	33.43	32.22
Zm00001d014696_P002	Maize	cytosol	32.85	31.84
TraesCS7B01G316200.1	Wheat	cytosol	32.56	31.3
TraesCS7A01G416200.1	Wheat	cytosol	31.99	30.75
TraesCS7D01G409500.1	Wheat	cytosol	31.7	30.47
Os06t0702800-01	Rice	cytosol	29.68	28.22
HORVU7Hr1G096480.4	Barley	plastid	32.28	23.19

Protein Annotations

EMBL:ACUP02000005	EnsemblPlants:KRH74139	EnsemblPlantsGene:GLYMA_01G001700	EntrezGene:100810680	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	GO:GO:0015919	GO:GO:0016020	GO:GO:0016021
InterPro:APEM9	PANTHER:PTHR36361	ProteinID:KRH74139	ProteinID:KRH74139.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00023375EE	UniProt:I1J4A6	MapMan:23.4.1.5.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:269385..274045

Molecular Weight (calculated)

38818.7 Da

IEP (calculated)

7.219

GRAVY (calculated)

-0.045

Length

347 amino acids

Sequence
(BLAST)

001: MDSDAAAAIA IWKEIEASES YLVCSMYEEA AELASSVLER LRHGHHDIDR DMLESSAMVL LQAFNQLPTK TPDILNQLKL HFVSLKAIPT LVLLTGACFQ
101: IAQGSESALA SVQQFLHDFL NGWSLEHSQY SSVITEAASR DQSPRFILPV DEYLQVVELY ALTLLATVQK DVDLAISWVE NASLPEENRQ GLLRSLHSMH
201: SSKSTILSQS SFQQSPTNSN EAYPLKEQSV SEGLPKALKS NEKYRSKEAV TKLSERIEAC FWCFRGINLK IGTTKFVITS GKIMLGCLIL FIYYVFRKKQ
301: ATLNRIVRRQ AMAVKRALVD LWQLAFSYQV NPLAAVQPLS AATRQGQ

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.