Factsheet for Os06t0702800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88914	Sorghum	cytosol	65.75	66.67
TraesCS7B01G316200.1	Wheat	cytosol	65.48	66.2
TraesCS7A01G416200.1	Wheat	cytosol	64.66	65.37
Zm00001d014696_P002	Maize	cytosol	64.11	65.36
TraesCS7D01G409500.1	Wheat	cytosol	64.11	64.82
HORVU7Hr1G096480.4	Barley	plastid	66.03	49.9
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	41.37	41.03
Solyc07g017290.2.1	Tomato	cytosol	32.33	33.62
AT3G10572.1	Thale cress	cytosol	29.59	32.43
Bra001369.1-P	Field mustard	plasma membrane	29.32	32.42
CDX73917	Canola	plasma membrane	29.32	32.42
Solyc12g017470.1.1	Tomato	cytosol	31.78	32.4
CDY00956	Canola	cytosol	28.22	31.69
CDY08590	Canola	cytosol	27.95	31.48
Bra029853.1-P	Field mustard	cytosol	27.95	31.38
VIT_07s0130g00080.t01	Wine grape	cytosol	33.42	31.36
PGSC0003DMT400016535	Potato	cytosol	27.12	31.33
CDY00682	Canola	cytosol	10.14	31.09
CDY00683	Canola	cytosol	13.15	30.57
KRH74139	Soybean	cytosol	28.22	29.68
PGSC0003DMT400024738	Potato	mitochondrion	13.42	28.49
KRH49075	Soybean	cytosol	27.4	27.4

Protein Annotations

MapMan:23.4.1.5.2	EntrezGene:4341980	EMBL:AK073948	InterPro:APEM9	ProteinID:BAD54032.1	ProteinID:BAF20408.1
ProteinID:BAS99365.1	ncoils:Coil	ProteinID:EEE66313.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0015919	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
EnsemblPlantsGene:Os06g0702800	EnsemblPlants:Os06t0702800-01	PANTHER:PTHR36361	UniProt:Q5Z824	TMHMM:TMhelix	UniParc:UPI0000446F07
RefSeq:XP_015641036.1	SEG:seg	:	:	:	:

Description

Conserved hypothetical protein. (Os06t0702800-01)

Coordinates

chr6:+:29670439..29673498

Molecular Weight (calculated)

40538.3 Da

IEP (calculated)

7.868

GRAVY (calculated)

-0.183

Length

365 amino acids

Sequence
(BLAST)

001: MGTSAQEPNL WKQIDDAEHY LVSGLFEQAV STALSVSSQV HSAAMENSCD HDELLEMLEL AGMVLVQALK ELKRTSEMFI QLKTIYGSVA SIPLKIFITG
101: ATMHMAGGSG SDLRPIFDEY LAKWRYTDDQ VYVLDEGKNS SSNGLVVTSV MSPEQYFEVA ELYTVTFLSV VSHETATAIS WTEKAELTEQ DRQDLLRKLH
201: ALQSAANKKS TNQGAKLSES AERNLSTSQN GSISPAHEDA TKSSAPTHNG NIQGLRKALP KSIQPSFQRV TNQFDPLFWW FHSFRIKFGK VHVVLPSGKV
301: MFLFSLLFST LYILRRKGAA LKRTAFQQIS SLRRGFLDAL QLAFSTQINP LAAVQQVPQA PRASW

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.