CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73917	Canola	plasma membrane	84.08	40.0
CDY08590	Canola	cytosol	77.07	37.35
AT3G10572.1	Thale cress	cytosol	77.07	36.34
CDY00956	Canola	cytosol	74.52	36.0
PGSC0003DMT400024738	Potato	mitochondrion	25.48	23.26
KRH74139	Soybean	cytosol	42.04	19.02
KRH49075	Soybean	cytosol	41.4	17.81
Solyc07g017290.2.1	Tomato	cytosol	38.85	17.38
Solyc12g017470.1.1	Tomato	cytosol	38.85	17.04
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	38.22	16.3
VIT_07s0130g00080.t01	Wine grape	cytosol	40.13	16.2
Os06t0702800-01	Rice	cytosol	30.57	13.15
TraesCS7B01G316200.1	Wheat	cytosol	28.66	12.47
EER88914	Sorghum	cytosol	28.03	12.22
TraesCS7A01G416200.1	Wheat	cytosol	28.03	12.19
PGSC0003DMT400016535	Potato	cytosol	24.2	12.03
Zm00001d014696_P002	Maize	cytosol	27.39	12.01
TraesCS7D01G409500.1	Wheat	cytosol	27.39	11.91
HORVU7Hr1G096480.4	Barley	plastid	28.66	9.32
CDY00682	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY00683	EnsemblPlantsGene:GSBRNA2T00110519001	GO:GO:0006810	GO:GO:0008150	GO:GO:0015919	InterPro:APEM9
PANTHER:PTHR36361	ProteinID:CDY00683	ProteinID:CDY00683.1	SEG:seg	UniParc:UPI0004EE9233	MapMan:23.4.1.5.2

Description

BnaC03g36670D

Coordinates

chrLK031921:+:236688..237337

Molecular Weight (calculated)

17463.8 Da

IEP (calculated)

7.669

GRAVY (calculated)

-0.130

Length

157 amino acids

Sequence
(BLAST)

001: MEAVELYTFG VLAKDTKDMG LAVSWVEKAA LPEETRQGLL RRLHSLLSLK SANVPEATSF EENSSYDVVN NNKSLANDEV DYVLKLSKQH EPWSSRPLSL
101: RLGNTRFSIS RGKVALGLNF GDVNIYIVKA IVDFWKLAFS YQVNPLAAIQ SIPSTTT

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.