Factsheet for PGSC0003DMT400024738

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400016535	Potato	cytosol	91.86	50.0
Solyc07g017290.2.1	Tomato	cytosol	94.19	46.15
CDY00683	Canola	cytosol	23.26	25.48
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	40.12	18.75
KRH74139	Soybean	cytosol	37.21	18.44
KRH49075	Soybean	cytosol	38.95	18.36
VIT_07s0130g00080.t01	Wine grape	cytosol	40.12	17.74
Bra001369.1-P	Field mustard	plasma membrane	31.98	16.67
CDY00956	Canola	cytosol	31.4	16.62
Bra029853.1-P	Field mustard	cytosol	30.23	16.0
CDX73917	Canola	plasma membrane	30.23	15.76
CDY08590	Canola	cytosol	27.91	14.81
AT3G10572.1	Thale cress	cytosol	28.49	14.71
Zm00001d014696_P002	Maize	cytosol	30.23	14.53
TraesCS7B01G316200.1	Wheat	cytosol	29.65	14.13
TraesCS7D01G409500.1	Wheat	cytosol	29.65	14.13
TraesCS7A01G416200.1	Wheat	cytosol	29.07	13.85
Os06t0702800-01	Rice	cytosol	28.49	13.42
EER88914	Sorghum	cytosol	27.91	13.33
HORVU7Hr1G096480.4	Barley	plastid	29.07	10.35
CDY00682	Canola	cytosol	0.58	0.84

Protein Annotations

EnsemblPlants:PGSC0003DMT400024738	EnsemblPlantsGene:PGSC0003DMG400009563	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0008150	GO:GO:0015919	GO:GO:0016020	GO:GO:0016021	InterPro:APEM9	PANTHER:PTHR36361
PGSC:PGSC0003DMG400009563	TMHMM:TMhelix	UniParc:UPI000296BB94	UniProt:M1AKK1	MapMan:23.4.1.5.2	:

Description

3-phosphoinositide-dependent protein kinase-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400009563]

Coordinates

chr7:-:9662617..9663540

Molecular Weight (calculated)

19793.9 Da

IEP (calculated)

8.702

GRAVY (calculated)

-0.179

Length

172 amino acids

Sequence
(BLAST)

001: MEEFSNQISL GVDKYLEIIE LYVITFLGRI LGNLDLAISW VEKFPLPEEK RQDLLRQLHS MNTLKLVSSS QSSALPLQID ECTTDSTSLI EEKSCNGTAN
101: ILEHRDQSKG ENTMKQSILE FSRRRTPLWW FRTVTLKFGS SRLVLSNGSI FLGFLAALVY YTVRRKQASL WR

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.