Factsheet for GSMUA_Achr5P05040_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g017290.2.1	Tomato	cytosol	42.39	44.44
Solyc12g017470.1.1	Tomato	cytosol	41.3	42.46
PGSC0003DMT400016535	Potato	cytosol	36.14	42.09
VIT_07s0130g00080.t01	Wine grape	cytosol	44.29	41.9
Zm00001d014696_P002	Maize	cytosol	40.76	41.9
Os06t0702800-01	Rice	cytosol	41.03	41.37
TraesCS7B01G316200.1	Wheat	cytosol	40.49	41.27
CDY00682	Canola	cytosol	13.32	41.18
CDY00956	Canola	cytosol	35.87	40.62
TraesCS7D01G409500.1	Wheat	cytosol	39.67	40.44
TraesCS7A01G416200.1	Wheat	cytosol	39.67	40.44
Bra029853.1-P	Field mustard	cytosol	35.6	40.31
EER88914	Sorghum	cytosol	39.4	40.28
PGSC0003DMT400024738	Potato	mitochondrion	18.75	40.12
Bra001369.1-P	Field mustard	plasma membrane	35.87	40.0
AT3G10572.1	Thale cress	cytosol	35.87	39.64
CDX73917	Canola	plasma membrane	35.05	39.09
CDY08590	Canola	cytosol	34.24	38.89
CDY00683	Canola	cytosol	16.3	38.22
KRH74139	Soybean	cytosol	35.87	38.04
KRH49075	Soybean	cytosol	35.87	36.16
HORVU7Hr1G096480.4	Barley	plastid	40.76	31.06

Protein Annotations

EnsemblPlants:GSMUA_Achr5P05040_001	EnsemblPlants:GSMUA_Achr5T05040_001	EnsemblPlantsGene:GSMUA_Achr5G05040_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005730	GO:GO:0005737	GO:GO:0005777	GO:GO:0006810	GO:GO:0008150
GO:GO:0015919	GO:GO:0043574	InterPro:APEM9	PANTHER:PTHR36361	SEG:seg	UniParc:UPI000295BA8E
UniProt:M0SVT3	MapMan:23.4.1.5.2	:	:	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G05040_001]

Coordinates

chr5:-:3695878..3700625

Molecular Weight (calculated)

40690.4 Da

IEP (calculated)

7.500

GRAVY (calculated)

0.087

Length

368 amino acids

Sequence
(BLAST)

001: MALLTVSAIW NEIDLSESYL VCCMFKEAAS LASSTVHRVR STPFADAVDD VQMAEMMESA GMVFVQSMKE LGRTQELFVE LRELFGSVET IPVQVFLTGA
101: CMQISERFTS NLRAIFEEFL SKWKYVDGGI YVWTVAEPES SSDKVGMKQP IMGAKNYLEI AEVYTITVLG MVLCSPDLAI SWTEKAELPD ESRQVLLRRL
201: HSLVSAKNSS SHSNLGGGLR PEQAHSLSSS TSGSTFSGNE AYPEAMKQEL HSAGGRSMGG LFKTVRPSIR NILEQISCCF WWFRTIHLKF GNVHLVLPSG
301: KQMLVCSLIV LTYYILRRKG TILKRSVATQ AAAIKRALVD AWQLAFSVQV NPLAAIQQLP SAPHGSMQ

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.