Factsheet for VIT_07s0130g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00682	Canola	cytosol	15.17	49.58
KRH74139	Soybean	cytosol	42.93	48.13
Solyc07g017290.2.1	Tomato	cytosol	42.42	47.01
KRH49075	Soybean	cytosol	42.93	45.75
Solyc12g017470.1.1	Tomato	cytosol	41.65	45.25
CDY00956	Canola	cytosol	37.02	44.31
PGSC0003DMT400016535	Potato	cytosol	35.99	44.3
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	41.9	44.29
Bra001369.1-P	Field mustard	plasma membrane	37.53	44.24
Bra029853.1-P	Field mustard	cytosol	36.5	43.69
AT3G10572.1	Thale cress	cytosol	37.28	43.54
CDY08590	Canola	cytosol	36.25	43.52
CDX73917	Canola	plasma membrane	36.25	42.73
CDY00683	Canola	cytosol	16.2	40.13
PGSC0003DMT400024738	Potato	mitochondrion	17.74	40.12
TraesCS7B01G316200.1	Wheat	cytosol	32.65	35.18
TraesCS7D01G409500.1	Wheat	cytosol	32.39	34.9
TraesCS7A01G416200.1	Wheat	cytosol	32.13	34.63
EER88914	Sorghum	cytosol	31.62	34.17
Zm00001d014696_P002	Maize	cytosol	31.36	34.08
Os06t0702800-01	Rice	cytosol	31.36	33.42
HORVU7Hr1G096480.4	Barley	plastid	33.42	26.92

Protein Annotations

EntrezGene:100259625	wikigene:100259625	MapMan:23.4.1.5.2	InterPro:APEM9	ProteinID:CCB51331	ProteinID:CCB51331.1
UniProt:F6HGI5	EMBL:FN595755	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005777	GO:GO:0006810	GO:GO:0008150	GO:GO:0015919
GO:GO:0016020	GO:GO:0016021	GO:GO:0043574	EntrezGene:LOC100259625	wikigene:LOC100259625	PANTHER:PTHR36361
TIGR:TC71080	TMHMM:TMhelix	UniParc:UPI000210AA38	ArrayExpress:VIT_07s0130g00080	EnsemblPlantsGene:VIT_07s0130g00080	EnsemblPlants:VIT_07s0130g00080.t01
unigene:Vvi.2555	RefSeq:XP_002268263	RefSeq:XP_002268263.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:-:20281344..20298867

Molecular Weight (calculated)

44129.2 Da

IEP (calculated)

6.601

GRAVY (calculated)

-0.264

Length

389 amino acids

Sequence
(BLAST)

001: MEWGGTRQAH LRIRLQNREE RRGEERREET REGERAMVAI WEEIELSESY LVCCMFEEAA TMASSVLKHV CDNKSTDVRE DDQLYDIMES AGMVLVQSLK
101: ELGRTLEILN ELRQLFGSVT AIPIQVLLAG ACFEISEGST FGVKQFLEEF LGKWRYVDEQ YYVPAGREPN VVCMGGCDRS FTLGIGEYLE VVDVYVVTLL
201: GSVLNDMEHA FSWVEKAELP EEKRKELLMT LHSLHPPKAK LSQGSLSNSL VDDHEAHCSS SKEVILSEGH LKGLKPQHPP TNGEKDRRTT VLNLSKRMDS
301: CFWWYRSITL KLGNTRVVIS NGKIMLGCLI FLVYYIFRRK RATLKRIASR QASSMKEALT SLWQLAFSYQ VNPLAALQPL PAAAPGNRS

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.