Factsheet for Solyc07g017290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024738	Potato	mitochondrion	46.15	94.19
Solyc12g017470.1.1	Tomato	cytosol	86.61	84.92
CDY00682	Canola	cytosol	15.67	46.22
CDY00956	Canola	cytosol	40.74	44.0
Bra029853.1-P	Field mustard	cytosol	40.17	43.38
KRH74139	Soybean	cytosol	42.45	42.94
CDY08590	Canola	cytosol	39.32	42.59
VIT_07s0130g00080.t01	Wine grape	cytosol	47.01	42.42
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	44.44	42.39
Bra001369.1-P	Field mustard	plasma membrane	39.6	42.12
CDX73917	Canola	plasma membrane	38.75	41.21
KRH49075	Soybean	cytosol	42.17	40.55
AT3G10572.1	Thale cress	cytosol	38.46	40.54
CDY00683	Canola	cytosol	17.38	38.85
Zm00001d014696_P002	Maize	cytosol	35.9	35.2
TraesCS7B01G316200.1	Wheat	cytosol	34.47	33.52
TraesCS7D01G409500.1	Wheat	cytosol	34.47	33.52
TraesCS7A01G416200.1	Wheat	cytosol	34.19	33.24
EER88914	Sorghum	cytosol	33.62	32.78
Os06t0702800-01	Rice	cytosol	33.62	32.33
HORVU7Hr1G096480.4	Barley	plastid	34.19	24.84

Protein Annotations

EnsemblPlants:Solyc07g017290.2.1	EnsemblPlantsGene:Solyc07g017290.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0008150	GO:GO:0015919	GO:GO:0016020	GO:GO:0016021	InterPro:APEM9	PANTHER:PTHR36361
TMHMM:TMhelix	UniParc:UPI000276BDF1	UniProt:K4CCE5	MapMan:23.4.1.5.2	:	:

Description

No Description!

Coordinates

chr7:-:6660512..6668953

Molecular Weight (calculated)

39591.9 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.037

Length

351 amino acids

Sequence
(BLAST)

001: MSMEGAPSFL TWDEIELSES YLVCCMFQEA ATLSSSIIEQ LIEKNGKMNE DNCELGDMLE SAAMILVQSY KELGRTSEIL KQLKMLFGSV SAVPAQVFLT
101: GVCLQIPDGP SAEVQEILEE FLMKWRYVDG KYYTVASMEE FSNQISLGVD KYLEIVELYV ITFLGRILGN LDLAISWVEK FPLPEEKRQD LLRQLHSMNT
201: LKLVSTSQSS ALPLQIDECT TDSTSLIEEK SCNGTANILE HRDLSKGENT KKQSILEFPR RRTPLWWFRT VTLKFGSSRL VLSNGSISLG FLAALFYYIV
301: RRKQASLWSV LKRQASSTKK ALVDFWQLAF SYQVNPLAAV QPLPPATLGS R

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.