CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029853.1-P	Field mustard	cytosol	95.68	95.38
CDY00956	Canola	cytosol	91.36	91.08
CDX73917	Canola	plasma membrane	80.25	78.79
CDY00683	Canola	cytosol	37.35	77.07
AT3G10572.1	Thale cress	cytosol	79.01	76.88
CDY00682	Canola	cytosol	27.78	75.63
Solyc07g017290.2.1	Tomato	cytosol	42.59	39.32
KRH74139	Soybean	cytosol	40.43	37.75
Solyc12g017470.1.1	Tomato	cytosol	41.05	37.15
VIT_07s0130g00080.t01	Wine grape	cytosol	43.52	36.25
KRH49075	Soybean	cytosol	40.43	35.89
PGSC0003DMT400016535	Potato	cytosol	33.64	34.49
GSMUA_Achr5P05040_001	Banana	cytosol, extracellular	38.89	34.24
Os06t0702800-01	Rice	cytosol	31.48	27.95
Zm00001d014696_P002	Maize	cytosol	30.86	27.93
PGSC0003DMT400024738	Potato	mitochondrion	14.81	27.91
TraesCS7B01G316200.1	Wheat	cytosol	30.56	27.42
EER88914	Sorghum	cytosol	30.25	27.22
TraesCS7A01G416200.1	Wheat	cytosol	30.25	27.15
TraesCS7D01G409500.1	Wheat	cytosol	30.25	27.15
HORVU7Hr1G096480.4	Barley	plastid	30.25	20.29

Protein Annotations

EnsemblPlants:CDY08590	EnsemblPlantsGene:GSBRNA2T00000380001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0008150	GO:GO:0015919	InterPro:APEM9	PANTHER:PTHR36361	ProteinID:CDY08590	ProteinID:CDY08590.1
SEG:seg	UniParc:UPI0004EE7878	UniProt:A0A078F2A4	MapMan:23.4.1.5.2	:	:

Description

BnaA05g28260DBnaA05g28260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2A4]

Coordinates

chrLK031986:-:827266..829203

Molecular Weight (calculated)

36069.3 Da

IEP (calculated)

4.730

GRAVY (calculated)

-0.023

Length

324 amino acids

Sequence
(BLAST)

001: MEATDGIWGE IERSESYLVC SMYEEAESLS SSILKGIFGN VETLGDHQLL DMLESAGMVL VQSLNGLGRA GEIVNELRQV FGETAAVPVQ VLLTGICLQI
101: SNGSYSGVRE ILEEFFSIWV YKDNHYILND AGLSEKVFHG NTSLDIDEYM EVVELYTFGV LGKDTNDVCL AVSWVEQAAL SEERRQGILR RLDSLLALKS
201: PNVQEATSLE ETPSYDVVNI NKSLASEKND YILKLSKQHE PWSSRPLSLS LGNTRFSMSR GKVAISLVGL IICYALQRKR AALIRIIRRQ MESTKKAIVD
301: FWKLAFSYQV NPLAAIQPIP STTT

Best Arabidopsis Sequence Match ( AT3G10572.1 )
(BLAST)

001: MEATDIWGEI ERSESYLVCS MYEEAESLSS SILKRIFGNI DVLSDEASQG DHQFHDMLES AGMVLVQSLH GIGRTVEIVN ELRDVFGEVA AIPVQVLLTG
101: VCLQISNGSY LGVRDILEEF FRIWVYKDNH YILNDAGVST KGFHAKNCLD IDEYMEVVEL YTFGVLAKFS NDMGLAISWV EKAALPEERR QGILRRLHSL
201: LSLKTASSFE ENSKDSSYAV VNNKKSLGNE KNDEIDSFLK LSKQHEPWSL WSSHPLSLKV GNTQFSMSRG KVAVSLVGLI ICYALKRKRA ALIRIIRRQM
301: ESTRKAIVDF WKLAFSYQVN PLAAIQSIPS TTT

Arabidopsis Description

APEM9Protein APEM9 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.