Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66139 | Canola | extracellular | 92.17 | 21.81 |
| CDX81435 | Canola | cytosol | 78.26 | 21.79 |
| CDY37202 | Canola | extracellular | 79.13 | 19.96 |
| CDX93108 | Canola | vacuole | 77.39 | 19.82 |
| CDY51660 | Canola | endoplasmic reticulum, extracellular, vacuole | 74.78 | 19.5 |
| Bra037202.1-P | Field mustard | extracellular | 79.13 | 19.4 |
| CDY70042 | Canola | vacuole | 75.65 | 19.38 |
| CDY23340 | Canola | vacuole | 73.91 | 18.12 |
| AT5G42240.1 | Thale cress | vacuole | 72.17 | 17.55 |
| PGSC0003DMT400076556 | Potato | extracellular, vacuole | 70.43 | 16.95 |
| VIT_12s0055g00820.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 69.57 | 16.88 |
| GSMUA_Achr6P29260_001 | Banana | plasma membrane | 68.7 | 16.7 |
| AT2G12480.3 | Thale cress | vacuole | 67.83 | 16.67 |
| CDX80725 | Canola | extracellular, vacuole | 68.7 | 16.6 |
| CDY48945 | Canola | extracellular, vacuole | 68.7 | 16.56 |
| Solyc01g104850.2.1 | Tomato | extracellular, vacuole | 68.7 | 16.53 |
| AT5G42230.2 | Thale cress | extracellular, vacuole | 65.22 | 15.99 |
| Os11t0213600-01 | Rice | plasma membrane | 63.48 | 15.7 |
| TraesCS4B01G106700.1 | Wheat | vacuole | 63.48 | 15.5 |
| TraesCS4D01G103600.1 | Wheat | vacuole | 63.48 | 15.47 |
| TraesCS4A01G202600.1 | Wheat | vacuole | 63.48 | 15.47 |
| TraesCS4A01G043900.1 | Wheat | vacuole | 59.13 | 15.32 |
| Zm00001d004691_P001 | Maize | vacuole | 61.74 | 15.01 |
| CDY65614 | Canola | extracellular, vacuole | 37.39 | 14.78 |
| TraesCS4B01G264700.1 | Wheat | vacuole | 60.0 | 14.65 |
| TraesCS4D01G264700.1 | Wheat | vacuole | 60.0 | 14.65 |
| EES08376 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 60.0 | 14.5 |
| Zm00001d049055_P001 | Maize | vacuole | 61.74 | 14.31 |
| GSMUA_Achr8P29460_001 | Banana | vacuole | 65.22 | 14.07 |
| HORVU4Hr1G016730.17 | Barley | plastid | 63.48 | 13.93 |
| CDY17183 | Canola | endoplasmic reticulum, vacuole | 50.43 | 12.55 |
| CDY19500 | Canola | vacuole | 50.43 | 12.53 |
| CDX90124 | Canola | vacuole | 49.57 | 12.39 |
| CDY11750 | Canola | endoplasmic reticulum, vacuole | 49.57 | 12.36 |
| CDY21526 | Canola | peroxisome | 31.3 | 12.24 |
| CDY46627 | Canola | vacuole | 47.83 | 12.11 |
| CDY61693 | Canola | vacuole | 46.96 | 11.84 |
| CDY39011 | Canola | vacuole | 6.96 | 1.9 |
| CDY21525 | Canola | vacuole | 2.61 | 1.52 |
| CDY68103 | Canola | vacuole | 1.74 | 1.03 |
| CDY34806 | Canola | vacuole | 0.0 | 0.0 |
| CDX76846 | Canola | vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.11320 | MapMan:50.3.4 | GO:A0A078JLZ1 | UniProt:A0A078JLZ1 | InterPro:AB_hydrolase | EnsemblPlants:CDY66771 |
| ProteinID:CDY66771 | ProteinID:CDY66771.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004185 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00055718001 | InterPro:IPR029058 |
| PFAM:PF00450 | PANTHER:PTHR11802 | PANTHER:PTHR11802:SF20 | InterPro:Peptidase_S10 | SUPFAM:SSF53474 | UniParc:UPI0004EF0721 |
Description
BnaC02g44710DBnaC02g44710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLZ1]
Coordinates
chrLK035456:+:1101..1569
Molecular Weight (calculated)
12913.4 Da
IEP (calculated)
8.266
GRAVY (calculated)
-0.228
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFSAKHPAC RHCSGDQDSV VPLLGSRTLV RELAHDLNFS TTLPYGPWFH KDQVGGWVTE YGELLTFATV RGAAHMVPYA QPSRALHLFS GFVRGRRLPN
101: NTHERGEISL LDIFS
101: NTHERGEISL LDIFS
001: MVSSRAVVMA IMVLVTVQWL VFAEGYPEED LVARLPGQPN VGFRQFAGYV DVDSENGRSL FYYYVEAVKE PDTKPLTLWL NGGPGCSSVG GGAFTELGPF
101: YPTGDGRGLR LNSMSWNKAS NLLFVESPAG VGWSYSNRSS DYNTGDKSTV NDMLVFLLRW FNKFPELKSR DLFLTGESYA GHYIPQLADV ILSYNSRSSG
201: FKFNVKGIAI GNPLLKLDRD FAAAYEYFWS HGMISDEVRL TIMNQCDFAN PKNMSNACIY AIVESSVLTE YINSYHILLD VCYPSIVQQE LRLKKMNALH
301: ANRTRLPYEW TMCSNRLNYS GIDGYIDMLP SLKRIIQNQT PVWIFSGDQD SVIPLQSSRT LVRELAEDLN FKTTIPYGAW FHKEQVGGWV TEYGNLLTFA
401: TVRGAAHMVP YAEPSRALHM FSSFMNGRRL PNKPDLKSST DD
101: YPTGDGRGLR LNSMSWNKAS NLLFVESPAG VGWSYSNRSS DYNTGDKSTV NDMLVFLLRW FNKFPELKSR DLFLTGESYA GHYIPQLADV ILSYNSRSSG
201: FKFNVKGIAI GNPLLKLDRD FAAAYEYFWS HGMISDEVRL TIMNQCDFAN PKNMSNACIY AIVESSVLTE YINSYHILLD VCYPSIVQQE LRLKKMNALH
301: ANRTRLPYEW TMCSNRLNYS GIDGYIDMLP SLKRIIQNQT PVWIFSGDQD SVIPLQSSRT LVRELAEDLN FKTTIPYGAW FHKEQVGGWV TEYGNLLTFA
401: TVRGAAHMVP YAEPSRALHM FSSFMNGRRL PNKPDLKSST DD
Arabidopsis Description
SCPL43serine carboxypeptidase-like 43 [Source:TAIR;Acc:AT2G12480]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.