CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70042	Canola	vacuole	96.66	96.66
Bra013152.1-P	Field mustard	vacuole	98.89	95.28
CDY66771	Canola	cytosol	19.82	77.39
CDX81435	Canola	cytosol	70.6	76.76
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	73.94	75.28
AT5G42240.1	Thale cress	vacuole	78.62	74.63
CDY23340	Canola	vacuole	77.28	73.99
AT2G12480.3	Thale cress	vacuole	76.17	73.08
CDY37202	Canola	extracellular	73.5	72.37
CDY66139	Canola	extracellular	77.51	71.6
AT5G42230.2	Thale cress	extracellular, vacuole	72.38	69.3
CDX80725	Canola	extracellular, vacuole	71.05	67.02
CDY48945	Canola	extracellular, vacuole	70.82	66.67
Os11t0213600-01	Rice	plasma membrane	67.71	65.38
Zm00001d004691_P001	Maize	vacuole	67.48	64.06
TraesCS4A01G202600.1	Wheat	vacuole	67.04	63.77
TraesCS4B01G264700.1	Wheat	vacuole	66.82	63.69
TraesCS4B01G106700.1	Wheat	vacuole	66.82	63.69
TraesCS4D01G103600.1	Wheat	vacuole	66.82	63.56
PGSC0003DMT400076556	Potato	extracellular, vacuole	67.48	63.39
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	66.82	63.29
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	67.04	63.24
TraesCS4D01G264700.1	Wheat	vacuole	65.7	62.63
Solyc01g104850.2.1	Tomato	extracellular, vacuole	66.59	62.55
TraesCS4A01G043900.1	Wheat	vacuole	60.13	60.81
Zm00001d049055_P001	Maize	vacuole	67.04	60.69
HORVU4Hr1G016730.17	Barley	plastid	68.37	58.59
GSMUA_Achr8P29460_001	Banana	vacuole	69.27	58.35
GSMUA_Achr6P29260_001	Banana	plasma membrane	60.36	57.29
CDY21525	Canola	vacuole	20.27	45.96
CDY46627	Canola	vacuole	44.99	44.49
CDY68103	Canola	vacuole	19.15	44.33
CDY11750	Canola	endoplasmic reticulum, vacuole	45.43	44.25
CDX90124	Canola	vacuole	45.21	44.13
CDY61693	Canola	vacuole	44.77	44.08
CDY19500	Canola	vacuole	44.54	43.2
CDY17183	Canola	endoplasmic reticulum, vacuole	44.1	42.86
CDY65614	Canola	extracellular, vacuole	22.05	34.02
CDY34806	Canola	vacuole	8.91	33.33
CDX76846	Canola	vacuole	8.69	32.77
CDY39011	Canola	vacuole	30.07	32.14
CDY21526	Canola	peroxisome	20.04	30.61

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.11320	Gene3D:3.40.50.1820	GO:A0A078E0N1	InterPro:AB_hydrolase	EnsemblPlants:CDX93108
ProteinID:CDX93108	ProteinID:CDX93108.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00155020001	InterPro:IPR029058
PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PFscan:PS51257	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20
InterPro:Peptidase_S10	MEROPS:S10.A33	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	UniParc:UPI0004EE9FC9
SEG:seg	:	:	:	:	:

Description

BnaA03g38300D

Coordinates

chrLK031874:-:1221936..1225008

Molecular Weight (calculated)

50294.8 Da

IEP (calculated)

7.365

GRAVY (calculated)

-0.210

Length

449 amino acids

Sequence
(BLAST)

001: MVSCRALTVT MALMVVTVGC NFVKGYPEED LVVRLPGQPN VGFRQYAGYV NVDSKNGRSL FYYFVEADKQ PNTKPLTLWL NGGPGCSSVG GGAFTELGPF
101: YPTGDGRGLR INSMSWNKAS NLLFVESPAG VGWSYSNTSS DYNTGDETTA SDMVVFLLRW FNKFPELKSR DFFLTGESYA GHYIPQLADA ILSYNIHSTG
201: YKFNVKGIAI GNPLLELGMD TSATYDFFWS HGMISDETRG TITTHCDFSN LHNMSKVCND ALKEADTINE YVNNYDVLLD VCYPSIVQQE LRLKQMATKI
301: SMGVQQALHA NRTRLPYQWS MCSSLVNYRD TDASISMLPI LKRIIQNKTP VWIFSGDQDA VVPLLGSRTL VRELAHHLNF TTTLPYRPWF HKDQVGGWVT
401: EYGKLLTFAT VRGAAHMVPY AQPSRALHMF SSFVHGRRLP NNTHYSPDE

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.