CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65614	Canola	extracellular, vacuole	39.46	39.86
CDY66771	Canola	cytosol	12.24	31.3
HORVU7Hr1G094200.1	Barley	cytosol	20.75	24.11
CDX90124	Canola	vacuole	34.35	21.96
CDY61693	Canola	vacuole	34.01	21.93
CDY46627	Canola	vacuole	33.67	21.81
CDX81435	Canola	cytosol	30.27	21.55
CDY11750	Canola	endoplasmic reticulum, vacuole	33.67	21.48
CDY19500	Canola	vacuole	32.99	20.95
CDY17183	Canola	endoplasmic reticulum, vacuole	32.65	20.78
GSMUA_AchrUn_...	Banana	extracellular, vacuole	14.29	20.29
CDX93108	Canola	vacuole	30.61	20.04
CDY48945	Canola	extracellular, vacuole	31.63	19.5
CDY23340	Canola	vacuole	30.95	19.4
CDY70042	Canola	vacuole	29.59	19.38
CDY66139	Canola	extracellular	31.97	19.34
CDY39011	Canola	vacuole	27.55	19.29
CDX80725	Canola	extracellular, vacuole	30.95	19.12
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	27.55	18.37
CDY37202	Canola	extracellular	27.21	17.54
CDY34806	Canola	vacuole	1.36	3.33
CDY21525	Canola	vacuole	2.04	3.03
CDX76846	Canola	vacuole	0.68	1.68
KRG98789	Soybean	cytosol, mitochondrion	0.68	1.49
CDY68103	Canola	vacuole	0.34	0.52

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.11320	Gene3D:3.40.50.1820	GO:A0A078G830	UniProt:A0A078G830	InterPro:AB_hydrolase
EnsemblPlants:CDY21526	ProteinID:CDY21526	ProteinID:CDY21526.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00015972001
InterPro:IPR029058	PFAM:PF00450	ScanProsite:PS00560	PANTHER:PTHR11802	PANTHER:PTHR11802:SF15	InterPro:Peptidase_S10
SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	UniParc:UPI0004EB00D3	:	:	:

Description

BnaC09g47660DBnaC09g47660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G830]

Coordinates

chrLK032122:+:115679..117045

Molecular Weight (calculated)

32957.5 Da

IEP (calculated)

9.595

GRAVY (calculated)

-0.164

Length

294 amino acids

Sequence
(BLAST)

001: MLLGHYVPQL AEVIHDRNKK VTRDSRINLK GIMIGNPVIN EATDAAGIVD YAWSHALISD EVHKLIHDSC RFGDKLTAQC NKSFTGFTAY AAINIYSIYT
101: PVCLSSSPSS KNHTRVMSDH NLLTSQDIWG RLPYAYDPCT PHYAEKYFNR KDVQVALHAN VTNIPYPYTA CSSVIKWTEA PTTVIPIIQK LLKGGLRIWL
201: YRTGSFGYSG DTDGRLPVTS TRYSLRKMRL KVESPWRSWF HKSEVAGWVE TYAGGLTFVT VRGAGHQVPL FAPAQSLTLF SHFLASLPLP SSRF

Best Arabidopsis Sequence Match ( AT3G17180.1 )
(BLAST)

001: MNLTLPMKKQ KFLLIISLLI LLSLLHQDYH IEAQNSDKVV NLPEQPLNPK ISHFSGYVNV NQENTRSLFF WFFEALSESP STRPLVLWLN GGPGCSSIGY
101: GAASELGPFR VVENGTSLSF NQYSWVQEAN MLFLESPVGV GFSYTNSSSD LENLNDAFVA EDAYNFMVAW FARYPQYKSR DFFIAGESYA GHYSPQLAEL
201: IYDRNKVQPK DSFINLKGFI VGNPLTDDEY DNKGILEYAW SHAVISDHLY DSAKHNCDFK SSNWSEPCNV AMNTVFTKYK EIDIYNIYAP KCISNSSSGA
301: SYLGFGVNDK SPAVKDWFKR VRWFEGYDPC YSNYAEEYFN RVDVRLSLHA TTRNVARWKV CNDSILQTYH FTVSSMLPTY SKLIKAGLKI WVYSGDADGR
401: VPVIGSRYCV EALGISVKSE WRSWFHNHQV GGRITEYEGG LTFVTVRGAG HLVPLNKPEE ALALFRSFLN GQELPSSP

Arabidopsis Description

SCPL33Serine carboxypeptidase-like 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSM9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.