CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66771	Canola	cytosol	21.79	78.26
CDY37202	Canola	extracellular	84.02	76.1
CDY66139	Canola	extracellular	86.92	73.87
CDX93108	Canola	vacuole	76.76	70.6
CDY70042	Canola	vacuole	76.51	70.38
CDY23340	Canola	vacuole	79.42	69.94
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	73.85	69.16
AT5G42240.1	Thale cress	vacuole	75.54	65.96
AT2G12480.3	Thale cress	vacuole	73.85	65.17
AT5G42230.2	Thale cress	extracellular, vacuole	71.67	63.11
CDX80725	Canola	extracellular, vacuole	69.98	60.71
CDY48945	Canola	extracellular, vacuole	69.98	60.59
Os11t0213600-01	Rice	plasma membrane	65.86	58.49
PGSC0003DMT400076556	Potato	extracellular, vacuole	67.55	58.37
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	66.34	57.81
Solyc01g104850.2.1	Tomato	extracellular, vacuole	66.83	57.74
Zm00001d004691_P001	Maize	vacuole	65.38	57.08
TraesCS4A01G202600.1	Wheat	vacuole	64.89	56.78
TraesCS4D01G103600.1	Wheat	vacuole	64.89	56.78
TraesCS4B01G106700.1	Wheat	vacuole	64.65	56.69
TraesCS4A01G043900.1	Wheat	vacuole	60.53	56.31
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	64.65	56.09
TraesCS4B01G264700.1	Wheat	vacuole	63.2	55.41
TraesCS4D01G264700.1	Wheat	vacuole	63.2	55.41
Zm00001d049055_P001	Maize	vacuole	65.62	54.64
GSMUA_Achr8P29460_001	Banana	vacuole	67.31	52.16
HORVU4Hr1G016730.17	Barley	plastid	66.1	52.1
GSMUA_Achr6P29260_001	Banana	plasma membrane	58.35	50.95
CDY46627	Canola	vacuole	44.55	40.53
CDX90124	Canola	vacuole	45.04	40.43
CDY61693	Canola	vacuole	44.55	40.35
CDY11750	Canola	endoplasmic reticulum, vacuole	44.79	40.13
CDY21525	Canola	vacuole	19.13	39.9
CDY19500	Canola	vacuole	44.31	39.52
CDY17183	Canola	endoplasmic reticulum, vacuole	44.07	39.39
CDY68103	Canola	vacuole	18.4	39.18
CDY65614	Canola	extracellular, vacuole	23.73	33.68
CDY34806	Canola	vacuole	9.2	31.67
CDX76846	Canola	vacuole	8.96	31.09
CDY21526	Canola	peroxisome	21.55	30.27
CDY39011	Canola	vacuole	29.06	28.57

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	GO:A0A078CX69	InterPro:AB_hydrolase	EnsemblPlants:CDX81435	ProteinID:CDX81435
ProteinID:CDX81435.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00135018001	InterPro:IPR029058	PFAM:PF00450
PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	MEROPS:S10.A33
SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	UniParc:UPI0004EDD7BC	SEG:seg	:	:

Description

BnaC09g08460D

Coordinates

chrLK031824:-:1771686..1773997

Molecular Weight (calculated)

46242.1 Da

IEP (calculated)

7.209

GRAVY (calculated)

-0.151

Length

413 amino acids

Sequence
(BLAST)

001: MARESSVARV SEEDLVVRLP GQPKVLFRQY AVYVDVDSET GRSLFYYFVE ADSQPETKPL TLWLNGGPGC SSVGGGAFTE LGPFYPTGDG HGLRINSMSW
101: NKASNLLFVD SPAGVGDETT ASDMLVFLLR WFNKFPALKA RHLFLTGESY AGHYIPQLAD AIHSYNRQSS GFKINVKGIA IGNPLLKLDT DTSASYDFLW
201: YHGIISDERR HAIIRQCDFT SLPNISKECI EALTEVSLAN MYVNVYDMSM GVDVCMKHER QLYFNLPAVQ HALHVNRTSL PYQWSMCSTL VNYSGIDGNI
301: NMLPILKRII QNKTYVWISS GDQDSVVPLL GSRTLVRELA HDLNFSTTLP YGPWFHKNQV GGWVTEYGKI LTFATVRGAA HMVPYAPSRA LHIFSSFVRG
401: RRLPNSTHYS PDE

Best Arabidopsis Sequence Match ( AT2G12480.1 )
(BLAST)

001: MVSSRAVVMA IMVLVTVQWL VFAEGYPEED LVARLPGQPN VGFRQFAGYV DVDSENGRSL FYYYVEAVKE PDTKPLTLWL NGGPGCSSVG GGAFTELGPF
101: YPTGDGRGLR LNSMSWNKAS NLLFVESPAG VGWSYSNRSS DYNTGDKSTV NDMLVFLLRW FNKFPELKSR DLFLTGESYA GHYIPQLADV ILSYNSRSSG
201: FKFNVKGIAI GNPLLKLDRD FAAAYEYFWS HGMISDEVRL TIMNQCDFAN PKNMSNACIY AIVESSVLTE YINSYHILLD VCYPSIVQQE LRLKKMNALH
301: ANRTRLPYEW TMCSNRLNYS GIDGYIDMLP SLKRIIQNQT PVWIFSGDQD SVIPLQSSRT LVRELAEDLN FKTTIPYGAW FHKEQVGGWV TEYGNLLTFA
401: TVRGAAHMVP YAEPSRALHM FSSFMNGRRL PNKPDLKSST DD

Arabidopsis Description

SCPL43serine carboxypeptidase-like 43 [Source:TAIR;Acc:AT2G12480]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.