Factsheet for TraesCS4B01G264700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G264700.1	Wheat	vacuole	94.9	94.9
TraesCS4A01G043900.1	Wheat	vacuole	88.11	93.47
TraesCS4B01G106700.1	Wheat	vacuole	89.17	89.17
Os11t0213600-01	Rice	plasma membrane	83.01	84.09
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	82.38	81.51
HORVU4Hr1G016730.17	Barley	plastid	90.66	81.49
Zm00001d004691_P001	Maize	vacuole	79.62	79.28
Zm00001d049055_P001	Maize	vacuole	82.17	78.02
VIT_18s0001g15550.t01	Wine grape	extracellular	70.28	70.88
KRH64547	Soybean	extracellular, vacuole	70.7	70.4
KRH53391	Soybean	extracellular, vacuole	70.49	70.19
PGSC0003DMT400063802	Potato	vacuole	70.49	69.02
AT5G42240.1	Thale cress	vacuole	69.0	68.71
KRH15957	Soybean	nucleus	70.7	68.38
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	68.58	68.14
Bra013152.1-P	Field mustard	vacuole	66.24	66.95
CDX93108	Canola	vacuole	63.69	66.82
CDY70042	Canola	vacuole	63.48	66.59
GSMUA_Achr8P29460_001	Banana	vacuole	74.95	66.23
PGSC0003DMT400076556	Potato	extracellular, vacuole	67.09	66.11
AT2G12480.3	Thale cress	vacuole	65.18	65.6
CDX80725	Canola	extracellular, vacuole	65.82	65.13
Bra034921.1-P	Field mustard	extracellular, vacuole	65.82	64.99
CDY48945	Canola	extracellular, vacuole	65.82	64.99
AT5G42230.2	Thale cress	extracellular, vacuole	63.91	64.18
Bra040939.1-P	Field mustard	extracellular, vacuole	63.69	63.97
AT1G43780.1	Thale cress	extracellular, vacuole	64.97	63.88
CDX81435	Canola	cytosol	55.41	63.2
CDY23340	Canola	vacuole	62.63	62.9
Bra037202.1-P	Field mustard	extracellular	62.42	62.69
GSMUA_Achr6P29260_001	Banana	plasma membrane	62.84	62.58
CDY66139	Canola	extracellular	63.48	61.52
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	57.54	61.45
CDY66771	Canola	cytosol	14.65	60.0
Bra022715.1-P	Field mustard	extracellular	50.32	59.1
CDY37202	Canola	extracellular	56.9	58.77
Solyc10g054090.1.1	Tomato	extracellular	11.25	56.38
TraesCS2B01G304000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.16	44.44
TraesCS6B01G205500.1	Wheat	vacuole	43.95	44.04

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058
PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560	PFscan:PS51257	PANTHER:PTHR11802
PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS4B01G264700	EnsemblPlants:TraesCS4B01G264700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:535247075..535251438

Molecular Weight (calculated)

52625.6 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.178

Length

471 amino acids

Sequence
(BLAST)

001: MTGSWRAAAL AVAMVCWAAS SCMLGFPEED LVGRLPGQPI VGFRQFAGYV DVDDKAGRSL FYYFAEAQDN AAGKPLTLWL NGGPGCSSVG GGAFTELGPF
101: YPRGDGRGLR LNKKSWNKVS NLLFVESPAG VGWSYSNTSS DYNTGDTQTA NDMYKFLLGW YKKFPEYKSR SLFLSGESYA GHYIPQLTDV LLTHNEKSKG
201: FKFNIKGVAI GNPLLELDRY IRVTYEYFWS HGMISDEIFL AIKKDCDFED YTSGDPHNES KSCNDAIDEA KAMVGEYVDN YDVILDVCYP SIVTQELRLR
301: KYVTKISLGV DVCMSYESSF YFNLSEVQHA LHANRTHLTY GWSMCSDVLN LTGKDVYINI LPLLQRIVEQ KIPVWIFSGD QDSVVPLLGT RTLMRELAHA
401: MGLPVTAPYR AWFRKGQVGG WATEYGNMLT FATVRGASHM VPFSQPDRAL GLFRSFVLGQ RLPNTTHPPI D

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.