Factsheet for GSMUA_Achr6P29260_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
golgi 4
plasma membrane 6
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66771	Canola	cytosol	16.7	68.7
Os11t0213600-01	Rice	plasma membrane	67.44	68.6
TraesCS4B01G106700.1	Wheat	vacuole	66.6	66.88
KRH53391	Soybean	extracellular, vacuole	66.81	66.81
KRH64547	Soybean	extracellular, vacuole	66.81	66.81
TraesCS4A01G202600.1	Wheat	vacuole	66.38	66.53
TraesCS4D01G103600.1	Wheat	vacuole	66.38	66.53
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	65.54	65.13
VIT_18s0001g15550.t01	Wine grape	extracellular	64.06	64.88
GSMUA_Achr8P29460_001	Banana	vacuole	72.3	64.17
PGSC0003DMT400063802	Potato	vacuole	65.12	64.03
Zm00001d004691_P001	Maize	vacuole	63.85	63.85
KRH15957	Soybean	nucleus	65.54	63.66
TraesCS4D01G264700.1	Wheat	vacuole	63.0	63.27
AT5G42240.1	Thale cress	vacuole	63.21	63.21
TraesCS4B01G264700.1	Wheat	vacuole	62.58	62.84
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	62.79	62.66
PGSC0003DMT400076556	Potato	extracellular, vacuole	62.37	61.72
CDX80725	Canola	extracellular, vacuole	61.95	61.55
Zm00001d049055_P001	Maize	vacuole	64.48	61.49
CDY48945	Canola	extracellular, vacuole	61.73	61.22
Bra034921.1-P	Field mustard	extracellular, vacuole	61.73	61.22
TraesCS4A01G043900.1	Wheat	vacuole	57.29	61.04
AT2G12480.3	Thale cress	vacuole	60.25	60.9
Bra013152.1-P	Field mustard	vacuole	59.83	60.73
CDX93108	Canola	vacuole	57.29	60.36
CDY70042	Canola	vacuole	57.08	60.13
HORVU4Hr1G016730.17	Barley	plastid	66.38	59.92
AT5G42230.2	Thale cress	extracellular, vacuole	58.99	59.49
AT1G43780.1	Thale cress	extracellular, vacuole	59.62	58.87
Bra037202.1-P	Field mustard	extracellular	57.93	58.42
CDX81435	Canola	cytosol	50.95	58.35
Bra040939.1-P	Field mustard	extracellular, vacuole	57.29	57.78
CDY23340	Canola	vacuole	56.24	56.72
CDY66139	Canola	extracellular	57.72	56.17
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	51.37	55.1
Solyc10g054090.1.1	Tomato	extracellular	10.78	54.26
CDY37202	Canola	extracellular	52.22	54.17
Bra022715.1-P	Field mustard	extracellular	44.82	52.87
GSMUA_Achr9P01080_001	Banana	extracellular, vacuole	37.63	38.12
GSMUA_Achr10P...	Banana	vacuole	37.0	38.04
GSMUA_Achr6P11030_001	Banana	vacuole	37.21	37.69
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	11.21	32.92
GSMUA_AchrUn_...	Banana	extracellular, vacuole	12.69	28.99
GSMUA_Achr1P01930_001	Banana	vacuole	8.67	19.43
GSMUA_Achr6P29250_001	Banana	extracellular	4.44	17.36
GSMUA_Achr11P...	Banana	extracellular	3.38	16.16
GSMUA_Achr10P...	Banana	vacuole	1.69	7.62

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180
GO:GO:0004185	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G29260_001	EnsemblPlants:GSMUA_Achr6P29260_001
EnsemblPlants:GSMUA_Achr6T29260_001	InterPro:IPR029058	UniProt:M0TB71	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131
ScanProsite:PS00560	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS
InterPro:Ser_caboxypep_ser_AS	TMHMM:TMhelix	UniParc:UPI0002955A1E	SEG:seg	:	:

Description

Serine carboxypeptidase-like 42 [Source:GMGC_GENE;Acc:GSMUA_Achr6G29260_001]

Coordinates

chr6:+:29531569..29534976

Molecular Weight (calculated)

54894.4 Da

IEP (calculated)

6.914

GRAVY (calculated)

0.159

Length

473 amino acids

Sequence
(BLAST)

001: MYIYIYMYIY ICYIYVYTYI CMYIYIYIYM YVYIYIYVFM YVSIYIYVCM HVSIYIYIYI YIYIYIYIYI YIYICMYACI YIYVCPGCSS VGGGAFTELG
101: PFFPRGDGRG LRLNKMSWNK VSNLLFVESP AGVGWSYSNT TSDYNCGDES TANDMYKFLL RWYDKFPEFR LKNLFLTGES YAGHYIPQLA NVLLDHNQHS
201: TGFKFNIKGV AIGNPLLKLD RDAPATYEFF WSHGMISDEI GLTIMNQCDF EDYTFSNPHN VSKACNDAIE KANIIVGDYI NEYDVILDVC YPSIVEQELR
301: LRKYVTKMSV GVDVCMSVER YFYFNLPQVQ LALHANRTKL PYSWGMCSGL LNYSSTDVDI DILPLLKKII RHGTPVWVFS GDQDSVVPLL GSRTLVRELA
401: HDLNFRVTVP YGVWFYKGQV GGWVTEYGNL LTFATVRGAS HMVPYAQPAR ALRLFTSFIH GQRLPNSTHP SIS

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.