Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G12480.3 | Thale cress | vacuole | 78.65 | 79.49 |
| Bra013152.1-P | Field mustard | vacuole | 78.22 | 79.4 |
| CDY70042 | Canola | vacuole | 74.84 | 78.84 |
| CDX93108 | Canola | vacuole | 74.63 | 78.62 |
| AT5G42230.2 | Thale cress | extracellular, vacuole | 77.38 | 78.04 |
| CDX81435 | Canola | cytosol | 65.96 | 75.54 |
| Bra040939.1-P | Field mustard | extracellular, vacuole | 74.84 | 75.48 |
| Bra037202.1-P | Field mustard | extracellular | 74.63 | 75.27 |
| CDY23340 | Canola | vacuole | 73.57 | 74.2 |
| CDY66139 | Canola | extracellular | 75.26 | 73.25 |
| Bra022715.1-P | Field mustard | extracellular | 61.95 | 73.07 |
| CDY51660 | Canola | endoplasmic reticulum, extracellular, vacuole | 68.08 | 73.02 |
| PGSC0003DMT400076556 | Potato | extracellular, vacuole | 73.15 | 72.38 |
| Os11t0213600-01 | Rice | plasma membrane | 71.04 | 72.26 |
| CDY66771 | Canola | cytosol | 17.55 | 72.17 |
| TraesCS4B01G106700.1 | Wheat | vacuole | 71.46 | 71.76 |
| Solyc01g104850.2.1 | Tomato | extracellular, vacuole | 72.52 | 71.76 |
| TraesCS4D01G103600.1 | Wheat | vacuole | 71.46 | 71.61 |
| Zm00001d004691_P001 | Maize | vacuole | 71.46 | 71.46 |
| AT1G43780.1 | Thale cress | extracellular, vacuole | 72.3 | 71.4 |
| TraesCS4A01G202600.1 | Wheat | vacuole | 71.25 | 71.4 |
| VIT_12s0055g00820.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 71.46 | 71.31 |
| CDY37202 | Canola | extracellular | 68.29 | 70.83 |
| EES08376 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 71.04 | 70.59 |
| TraesCS4B01G264700.1 | Wheat | vacuole | 68.71 | 69.0 |
| TraesCS4D01G264700.1 | Wheat | vacuole | 68.5 | 68.79 |
| TraesCS4A01G043900.1 | Wheat | vacuole | 63.21 | 67.34 |
| Zm00001d049055_P001 | Maize | vacuole | 70.19 | 66.94 |
| HORVU4Hr1G016730.17 | Barley | plastid | 72.94 | 65.84 |
| GSMUA_Achr8P29460_001 | Banana | vacuole | 72.09 | 63.98 |
| GSMUA_Achr6P29260_001 | Banana | plasma membrane | 63.21 | 63.21 |
| AT2G33530.1 | Thale cress | extracellular, vacuole | 45.67 | 46.45 |
| AT1G28110.2 | Thale cress | vacuole | 45.24 | 46.42 |
| AT3G56540.1 | Thale cress | vacuole | 22.2 | 39.77 |
| AT3G52010.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 37.84 | 36.76 |
Protein Annotations
| MapMan:19.4.2.2 | Gene3D:3.40.50.1820 | EntrezGene:834229 | InterPro:AB_hydrolase | ProteinID:AED94786.1 | EMBL:AF361604 |
| ArrayExpress:AT5G42240 | EnsemblPlantsGene:AT5G42240 | RefSeq:AT5G42240 | TAIR:AT5G42240 | RefSeq:AT5G42240-TAIR-G | EnsemblPlants:AT5G42240.1 |
| TAIR:AT5G42240.1 | EMBL:AY143899 | ProteinID:BAB10197.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004180 |
| GO:GO:0004185 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0030312 | GO:GO:0051603 | InterPro:IPR029058 | RefSeq:NP_199039.1 | PFAM:PF00450 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00724 | ScanProsite:PS00131 | PANTHER:PTHR11802 | PANTHER:PTHR11802:SF20 | InterPro:Peptidase_S10 |
| UniProt:Q9FH05 | MEROPS:S10.A21 | SUPFAM:SSF53474 | InterPro:Ser_caboxypep_ser_AS | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00000AC295 | Symbol:scpl42 | SEG:seg | : | : | : |
Description
SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
Coordinates
chr5:+:16887626..16891192
Molecular Weight (calculated)
52876.9 Da
IEP (calculated)
7.091
GRAVY (calculated)
-0.149
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.