Factsheet for TraesCS4A01G043900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G264700.1	Wheat	vacuole	95.95	90.45
TraesCS4B01G264700.1	Wheat	vacuole	93.47	88.11
TraesCS4A01G202600.1	Wheat	vacuole	88.74	83.47
Os11t0213600-01	Rice	plasma membrane	81.98	78.28
HORVU4Hr1G016730.17	Barley	plastid	89.64	75.95
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	80.86	75.42
Zm00001d004691_P001	Maize	vacuole	78.83	74.0
Zm00001d049055_P001	Maize	vacuole	81.08	72.58
KRH64547	Soybean	extracellular, vacuole	68.47	64.27
KRH53391	Soybean	extracellular, vacuole	68.47	64.27
VIT_18s0001g15550.t01	Wine grape	extracellular	67.57	64.24
KRH15957	Soybean	nucleus	69.59	63.45
AT5G42240.1	Thale cress	vacuole	67.34	63.21
PGSC0003DMT400063802	Potato	vacuole	67.57	62.37
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	65.99	61.81
GSMUA_Achr8P29460_001	Banana	vacuole	73.87	61.54
CDX80725	Canola	extracellular, vacuole	65.54	61.13
Bra034921.1-P	Field mustard	extracellular, vacuole	65.54	61.01
CDY48945	Canola	extracellular, vacuole	65.54	61.01
AT5G42230.2	Thale cress	extracellular, vacuole	64.19	60.77
Bra013152.1-P	Field mustard	vacuole	63.74	60.73
CDX81435	Canola	cytosol	56.31	60.53
PGSC0003DMT400076556	Potato	extracellular, vacuole	64.86	60.25
CDY70042	Canola	vacuole	60.81	60.13
CDX93108	Canola	vacuole	60.81	60.13
AT2G12480.3	Thale cress	vacuole	63.06	59.83
CDY66771	Canola	cytosol	15.32	59.13
AT1G43780.1	Thale cress	extracellular, vacuole	63.51	58.87
Bra040939.1-P	Field mustard	extracellular, vacuole	61.49	58.21
Bra037202.1-P	Field mustard	extracellular	60.59	57.36
GSMUA_Achr6P29260_001	Banana	plasma membrane	61.04	57.29
CDY23340	Canola	vacuole	60.36	57.14
CDY66139	Canola	extracellular	62.16	56.79
Bra022715.1-P	Field mustard	extracellular	50.23	55.61
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	55.18	55.56
CDY37202	Canola	extracellular	54.95	53.51
Solyc10g054090.1.1	Tomato	extracellular	11.26	53.19
TraesCS2A01G287100.1	Wheat	vacuole	43.47	41.24
TraesCS6A01G179800.2	Wheat	vacuole	42.12	39.96
TraesCS5A01G244200.1	Wheat	plastid, vacuole	21.17	35.21
TraesCS5A01G239700.1	Wheat	vacuole	21.85	35.02
TraesCS4A01G300200.1	Wheat	vacuole	7.66	23.78

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058
PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560	PFscan:PS51257	PANTHER:PTHR11802
PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS4A01G043900	EnsemblPlants:TraesCS4A01G043900.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:36411799..36414760

Molecular Weight (calculated)

49465.7 Da

IEP (calculated)

6.943

GRAVY (calculated)

-0.216

Length

444 amino acids

Sequence
(BLAST)

001: MAGSWRAAAL AVAMVCWAAS SCVLGFPEED LVGRLPGQPI VGFRQFAGYV DVDGKAGRSL FYYSAEAQDH AAGKPLTLWL NGGPGCSSVG GGAFTELGPF
101: YPRGDGRGLR LNKKSWNKAG VGWSYSNTSS DYNTGDTRTA NDMYKFLLGW YKKFPEYRST SLFLSGESYA GHHIPQLTDV LLTHNEKSKG FKFNIKGVAI
201: GNPLLELDRY IRVRYEYFWS HGMISDEIFL AIKKDCDFED YTSGNPHNES KSCNDAIDEA IAMVGEYVDD YDVMSVTKIS LGVDVCMSYE GNFYFNLPEV
301: QHALHANRTH LPYSWSMCSD VLNFTGKDVY TNILPLLQRI VEQKIPVWVF SGDQDSVVPL LRTRTLVREL AHAMGLPVTV PYSSWFRKGQ VGGWATEYGN
401: MLTFATVRGA SHMVPFSQPD RALGLFRSFV LGQRLPNTTH RPID

Best Arabidopsis Sequence Match ( AT1G43780.1 )
(BLAST)

001: MVGGKWRFLE VAVVVMVLQW SCDYNGNLAE GFPVQDLVTK LPGQPEVAFR QFAGYVDIDV KAGRSLFYYF VEAEKQPHSK PLTLWLNGGP GCSSIGGGAF
101: TELGPFYPTG DARGLRRNPK SWNKASNLLF VDSPAGVGWS YSNTTSDYTT GDESTAKDML VFMLRWLEKF PQFKTRNLFL AGESYAGHYV PQLADVILEY
201: NAQRSNRFKF NLKGIAIGNP LLKLDRDVPA IYEFFWSHGM ISDELGLTIM NQCDFEDYTF TDSHNISKLC EAAVNQAGTI ITQYVNYYDI LLDVCYPSLF
301: EQELRLKKMG TRMSFGVDVC MSFEEQLYLN LPEVQKALHA NRTKLPYEWS MCSSLLNYKY TDGNANMLPI LKRIVKSKVP VWVFSGDEDS VIPLLGSRTL
401: VKELADDLNF NTTVPYGAWF DKGQVGGWVV EYGNLLTFAT VRGAAHMVPY SQPSRALHLF TSFVLGRKLP HKSPPALHD

Arabidopsis Description

SCPL44Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178WN63]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.