Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G244200.1 | Wheat | plastid, vacuole | 51.05 | 27.34 |
| TraesCS5A01G239700.1 | Wheat | vacuole | 50.35 | 25.99 |
| PGSC0003DMT400066638 | Potato | mitochondrion | 27.27 | 21.79 |
| AT3G56540.1 | Thale cress | vacuole | 34.27 | 18.56 |
| TraesCS2D01G090800.1 | Wheat | vacuole | 36.36 | 13.65 |
| TraesCS2A01G287100.1 | Wheat | vacuole | 27.27 | 8.33 |
| TraesCS6A01G179800.2 | Wheat | vacuole | 26.57 | 8.12 |
| AT3G52010.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 27.27 | 8.01 |
| TraesCS4A01G043900.1 | Wheat | vacuole | 23.78 | 7.66 |
| TraesCS4A01G202600.1 | Wheat | vacuole | 24.48 | 7.42 |
| KRH30255 | Soybean | peroxisome | 5.59 | 3.67 |
| Zm00001d015872_P001 | Maize | cytosol | 0.7 | 0.68 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G300200.1 | EnsemblPlantsGene:TraesCS4A01G300200 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004185 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:AB_hydrolase |
| InterPro:IPR029058 | InterPro:Peptidase_S10 | PANTHER:PTHR11802 | PANTHER:PTHR11802:SF59 | PFAM:PF00450 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF53474 | MapMan:19.4.2.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:597970675..597971288
Molecular Weight (calculated)
15514.2 Da
IEP (calculated)
6.387
GRAVY (calculated)
-0.213
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTITVGFHL FFLIPTIALH AHASSQEAHL TKFLSSKRSR SNISNKIGDP TSFHGGSFLG IASSPRTDGY SGSDHIAMKA ADKISALPGQ PEGVDFDQYG
101: GYVTVDDHNG RALFYYFVES PGNPMAKPLL LWLNGGEEDT LYY
101: GYVTVDDHNG RALFYYFVES PGNPMAKPLL LWLNGGEEDT LYY
001: MGKLQDWSIT TCLFLFFLHA SQTHCTSQSH VRNRLYRSKR GIGSSIDTSH LNAIRRLSVS LSLQNISGVN QQEQKERDLI ENLPGQPSVN FKQYGGYVTV
101: NESAGRSLYY YFVEATNTKN SSPLVLWLNG GPGCSSLYGA FQELGPFRVH SDNKTLYTNP YSWNNVANML FLESPAGTGF SYTNTTTDME NPGDMKTAAD
201: NYVFLVKWLE RFPEYKGRDF YIAGESYAGH YVQWRHGCGD FGDSYNVRTE DDESNGCYGM ASVV
101: NESAGRSLYY YFVEATNTKN SSPLVLWLNG GPGCSSLYGA FQELGPFRVH SDNKTLYTNP YSWNNVANML FLESPAGTGF SYTNTTTDME NPGDMKTAAD
201: NYVFLVKWLE RFPEYKGRDF YIAGESYAGH YVQWRHGCGD FGDSYNVRTE DDESNGCYGM ASVV
Arabidopsis Description
SCPL53Putative serine carboxypeptidase-like 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXY6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.