Factsheet for PGSC0003DMT400076556

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g104850.2.1	Tomato	extracellular, vacuole	94.35	94.35
AT5G42240.1	Thale cress	vacuole	72.38	73.15
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	72.18	72.78
PGSC0003DMT400063802	Potato	vacuole	72.38	71.93
Os11t0213600-01	Rice	plasma membrane	69.67	71.61
CDY66771	Canola	cytosol	16.95	70.43
TraesCS4D01G103600.1	Wheat	vacuole	68.41	69.28
TraesCS4B01G106700.1	Wheat	vacuole	68.2	69.21
Bra034921.1-P	Field mustard	extracellular, vacuole	69.04	69.18
CDY48945	Canola	extracellular, vacuole	69.04	69.18
TraesCS4A01G202600.1	Wheat	vacuole	68.2	69.07
Zm00001d004691_P001	Maize	vacuole	68.2	68.92
AT2G12480.3	Thale cress	vacuole	67.15	68.59
CDX80725	Canola	extracellular, vacuole	68.2	68.49
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	68.2	68.49
Bra013152.1-P	Field mustard	vacuole	66.74	68.45
AT1G43780.1	Thale cress	extracellular, vacuole	68.2	68.06
CDY70042	Canola	vacuole	63.6	67.71
CDX81435	Canola	cytosol	58.37	67.55
CDX93108	Canola	vacuole	63.39	67.48
Bra040939.1-P	Field mustard	extracellular, vacuole	66.11	67.38
TraesCS4B01G264700.1	Wheat	vacuole	66.11	67.09
AT5G42230.2	Thale cress	extracellular, vacuole	65.69	66.95
Bra037202.1-P	Field mustard	extracellular	65.06	66.31
CDY23340	Canola	vacuole	64.85	66.1
TraesCS4D01G264700.1	Wheat	vacuole	65.06	66.03
Zm00001d049055_P001	Maize	vacuole	67.57	65.12
TraesCS4A01G043900.1	Wheat	vacuole	60.25	64.86
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	59.62	64.63
CDY66139	Canola	extracellular	65.06	63.99
Bra022715.1-P	Field mustard	extracellular	52.93	63.09
HORVU4Hr1G016730.17	Barley	plastid	68.62	62.6
GSMUA_Achr6P29260_001	Banana	plasma membrane	61.72	62.37
GSMUA_Achr8P29460_001	Banana	vacuole	69.04	61.91
CDY37202	Canola	extracellular	58.79	61.62
PGSC0003DMT400063806	Potato	extracellular, vacuole	24.69	57.56
PGSC0003DMT400036974	Potato	extracellular, vacuole	43.72	45.93
PGSC0003DMT400066638	Potato	mitochondrion	17.15	45.81
PGSC0003DMT400074071	Potato	vacuole	42.89	44.96
PGSC0003DMT400066624	Potato	vacuole	10.88	42.98
PGSC0003DMT400002249	Potato	vacuole	44.35	42.74
PGSC0003DMT400066630	Potato	nucleus, peroxisome, vacuole	28.87	39.32
PGSC0003DMT400002245	Potato	cytosol	17.78	34.98
PGSC0003DMT400066626	Potato	extracellular, vacuole	24.27	29.37

Protein Annotations

EntrezGene:102580088	MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674
GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058	UniProt:M1CWY9	PFAM:PF00450
EnsemblPlantsGene:PGSC0003DMG400029765	PGSC:PGSC0003DMG400029765	EnsemblPlants:PGSC0003DMT400076556	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802
PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296FB48	RefSeq:XP_006351861.1	SEG:seg	:	:

Description

Serine carboxypeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG400029765]

Coordinates

chr1:+:81607965..81612487

Molecular Weight (calculated)

54393.8 Da

IEP (calculated)

6.322

GRAVY (calculated)

-0.217

Length

478 amino acids

Sequence
(BLAST)

001: MGNMQYFFLI RLFVFIIILN IGNGQYPIED LVDNLPGQPK VGFRQYAGYV DVDEKAGRSL FYYFVEAEKD AHKLPLTLWL NGGPGCSSIG GGAFTELGPF
101: FPRGDGHGLR RNTKSWNKAS NLLFIESPAG VGWSYSNTSS DYTCGDESTA KDMLNFMLKW YEKFSELKSR PLFLTGESYA GHYIPQLANV ILDYNKQSKD
201: FKFNLKGVAI GNPLLRVDRD VPAVYEYYWS HGMISDELFL IIKENCDFDD YEFPVPHNVS ITCNQAIDEA YKLISDYVNV YDVILDVCYP SIVQQELRLH
301: KQVTKMSVGV DVCMTSERYF YFNLPEVQKA LHANRTNLPY EWSMCSDVLN YSQSDGDIDM LPSLKNIIQH DVPLWIFSGD QDSVVPLIGS RTLVRELARD
401: LKFKTTVPYG AWFHKGQVGG WQVEYGEKLT FATVRGAAHM VPYAQPSRAL HLFTTFVHGR RLPNTTHIPI NSSFNLKN

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.