Factsheet for PGSC0003DMT400066624

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 9
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066626	Potato	extracellular, vacuole	98.35	30.13
PGSC0003DMT400066630	Potato	nucleus, peroxisome, vacuole	76.03	26.21
PGSC0003DMT400063806	Potato	extracellular, vacuole	26.45	15.61
PGSC0003DMT400066638	Potato	mitochondrion	21.49	14.53
PGSC0003DMT400076556	Potato	extracellular, vacuole	42.98	10.88
PGSC0003DMT400036974	Potato	extracellular, vacuole	39.67	10.55
PGSC0003DMT400063802	Potato	vacuole	41.32	10.39
PGSC0003DMT400074071	Potato	vacuole	38.02	10.09
PGSC0003DMT400002249	Potato	vacuole	40.5	9.88
PGSC0003DMT400002245	Potato	cytosol	0.0	0.0

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180
GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787
GO:GO:0019538	InterPro:IPR029058	UniProt:M1CFX0	PFAM:PF00450	EnsemblPlantsGene:PGSC0003DMG402025898	PGSC:PGSC0003DMG402025898
EnsemblPlants:PGSC0003DMT400066624	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF132	InterPro:Peptidase_S10
MEROPS:S10.A41	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	UniParc:UPI000296F8C2	:	:

Description

Serine carboxypeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG402025898]

Coordinates

chr1:-:84861826..84862657

Molecular Weight (calculated)

14043.9 Da

IEP (calculated)

6.243

GRAVY (calculated)

0.080

Length

121 amino acids

Sequence
(BLAST)

001: MVLKYLFLKL EKSVVIWVQL WYLFDINAVA NILFLESPAG VGFSYSNTSA DYITGDEKTR QDSFTFLLNW MERFPEYKHR DFYIVGESYA GHYVPQLAQL
101: ILSHRKTEPN LVINLQGIAV S

Best Arabidopsis Sequence Match ( AT3G07990.1 )
(BLAST)

001: MDYSFLLIIL LLTISTSCCA APSSYVEEQL RDRISNLPGQ PSNVDFRQYS GYVTVHEERG RALFYWLVES PLARDPKSRP LVLWLNGGPG CSSVAYGAAE
101: EIGPFRVGSD GKTLHSKLYA WNKLANLLFL ESPAGVGFSY SNTTSDLYTT GDQRTAEDSY IFLVNWFERF PQYKHREFYI VGESYAGHFV PQLSKLVHER
201: NKGFKNPAIN LKGFMVGNAV TDDYHDYIGT FEYWWNHGLI SDSTYHQLKT ACYSVSSQHP SMQCMVALRN AELEQGNIDP YSIFTKPCNS TVALKRFLKG
301: RYPWMSRAYD PCTERYSNVY FNRLDVQKAL HANVTRLSYP WKACSDIVGS YWDDSPLSML PIYKELITAG LKIWVFSGDT DAVVPITATR YSVDALKLAT
401: ITNWYPWYDH GKVGGWSQVY KGLTLVTVAG AGHEVPLHRP RQAFILFRSF LESKPMPMT

Arabidopsis Description

SCPL27Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178VCK8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.