Factsheet for PGSC0003DMT400074071

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 8
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036974	Potato	extracellular, vacuole	85.31	85.49
VIT_17s0000g00370.t01	Wine grape	vacuole	77.63	76.62
KRH00258	Soybean	vacuole	15.79	76.6
KRH63848	Soybean	nucleus	75.66	73.56
GSMUA_Achr9P01080_001	Banana	extracellular, vacuole	74.34	72.59
KRH54117	Soybean	nucleus, vacuole	74.56	72.34
KRH41079	Soybean	vacuole	74.12	71.31
GSMUA_Achr6P11030_001	Banana	vacuole	71.93	70.24
GSMUA_Achr10P...	Banana	vacuole	68.86	68.26
Os11t0522900-01	Rice	vacuole	70.61	68.22
TraesCS6D01G165200.2	Wheat	vacuole	69.3	67.52
TraesCS6B01G205500.1	Wheat	vacuole	69.52	67.45
OQU83511	Sorghum	extracellular, plastid, vacuole	70.83	67.15
TraesCS6A01G179800.2	Wheat	vacuole	68.64	66.88
TraesCS2B01G304000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	68.64	66.88
TraesCS2A01G287100.1	Wheat	vacuole	68.64	66.88
Zm00001d049276_P003	Maize	mitochondrion, vacuole	70.39	66.6
TraesCS2D01G285600.2	Wheat	vacuole	68.2	66.45
Os04t0396800-01	Rice	vacuole	68.42	66.38
EES10676	Sorghum	extracellular	68.86	66.24
Zm00001d007372_P002	Maize	vacuole	69.3	63.45
Zm00001d003895_P001	Maize	vacuole	67.76	58.97
PGSC0003DMT400063802	Potato	vacuole	46.05	43.66
PGSC0003DMT400076556	Potato	extracellular, vacuole	44.96	42.89
PGSC0003DMT400063806	Potato	extracellular, vacuole	18.2	40.49
PGSC0003DMT400066638	Potato	mitochondrion	15.79	40.22
PGSC0003DMT400002249	Potato	vacuole	43.64	40.12
PGSC0003DMT400066624	Potato	vacuole	10.09	38.02
PGSC0003DMT400066630	Potato	nucleus, peroxisome, vacuole	27.41	35.61
PGSC0003DMT400002245	Potato	cytosol	17.32	32.51
HORVU5Hr1G069460.1	Barley	vacuole	10.09	30.67
PGSC0003DMT400066626	Potato	extracellular, vacuole	23.03	26.58

Protein Annotations

EntrezGene:102591651	MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674
GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058	UniProt:M1CT34	PFAM:PF00450
EnsemblPlantsGene:PGSC0003DMG400028787	PGSC:PGSC0003DMG400028787	EnsemblPlants:PGSC0003DMT400074071	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802
PANTHER:PTHR11802:SF123	InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
UniParc:UPI0002954257	RefSeq:XP_015159912.1	SEG:seg	:	:	:

Description

Serine carboxypeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG400028787]

Coordinates

chr6:-:50583473..50586817

Molecular Weight (calculated)

51259.1 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.087

Length

456 amino acids

Sequence
(BLAST)

001: MALSLFFFLL CASVRIGYAF PPHPDKIILL PGQPQVGFQQ FSGYVTVDDK KQRALFYYFV EAETDPASKP LVLWLNGGPG CSSVGVGAFS ENGPFRPRGQ
101: VLVKNEHSWN KEANMLYLES PVGVGFSYST NTSSYETVND EITARDNVVF LQSWFNKFPQ YRKNNLFLTG ESYAGHYVPQ LANLMIELNN KKKLFNLKGV
201: ALGNPVLEFA TDFNSRAEYF WSHGLISDST YRMFTSVCNY SRYVSEYYRG GVSPMCSRVM SLVSRETSKF VDKYDVTLDV CMSSVLSQSK IISPQENGEK
301: IDVCIDDETV NYLNRQDVRT ALHARLVGVR SWDVCSTILD YQLLDIEIPT ISIVGLLVKE RIPVLIYSGD QDSVVPLTGS RSVVHQLANQ MGLNTTVPYR
401: VWFSGQQVGG WTQVYDNILS FATIRGAAHE APFSQPERSL VLFRSFLQGK ALPEVF

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.