Factsheet for PGSC0003DMT400066630

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, peroxisome, nucleus

Predictor Summary:

nucleus 2
vacuole 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066624	Potato	vacuole	26.21	76.03
PGSC0003DMT400066626	Potato	extracellular, vacuole	66.95	59.49
PGSC0003DMT400063802	Potato	vacuole	40.17	29.31
PGSC0003DMT400076556	Potato	extracellular, vacuole	39.32	28.87
PGSC0003DMT400074071	Potato	vacuole	35.61	27.41
PGSC0003DMT400036974	Potato	extracellular, vacuole	35.33	27.25
PGSC0003DMT400002249	Potato	vacuole	36.47	25.81
PGSC0003DMT400002245	Potato	cytosol	17.09	24.69
PGSC0003DMT400063806	Potato	extracellular, vacuole	13.39	22.93
PGSC0003DMT400066638	Potato	mitochondrion	11.4	22.35

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058	UniProt:M1CFX5	PFAM:PF00450	EnsemblPlantsGene:PGSC0003DMG403025898
PGSC:PGSC0003DMG403025898	EnsemblPlants:PGSC0003DMT400066630	PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560	PANTHER:PTHR11802
PANTHER:PTHR11802:SF132	InterPro:Peptidase_S10	MEROPS:S10.A41	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS
UniParc:UPI000296BED2	:	:	:	:	:

Description

Serine carboxypeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG403025898]

Coordinates

chr1:-:84868494..84870455

Molecular Weight (calculated)

39617.9 Da

IEP (calculated)

4.650

GRAVY (calculated)

-0.358

Length

351 amino acids

Sequence
(BLAST)

001: MVELGPFRVN EDGKTLWLNP FAWNKVANVL FLESPAGVGF SYSNTSSDYT TGDEKTRQDS FTFLVNWMER FPEYKHRDFY IVGESYAGHY VPQLAQLILS
101: HKKTKPNLVI NLQGIATGNA LLDDETWNSG SYDFYWTHAL ISDEVHEGIV KNCNFSTETS TSEACDKYTS EADSCQANIY SYNTYSQLCN SSAYTSLPID
201: GFDPCSDNYV DNYLNTIEVQ KALNVRDIPH SWGSCSNDIG GYWQDSPDTV LPIFQELMQS GIRVWIYSGD IDHILSVTTS RYDINKIKTP VKTAWYPWSF
301: HGEVGGYAVE YQNLTFVTVR GAGHFVPSYQ PGRALTMFSS FINGTLPPGF H

Best Arabidopsis Sequence Match ( AT2G35780.1 )
(BLAST)

001: MARLLLLFFF FLILLHYASC SRHEQEKDRI FHLPGEPNDV SFSHFSGYIT VNESAGRALF YWLTESPPSE NPESKPLVLW LNGGPGCSSV AYGAAEEIGP
101: FRINPDGKTL YHNPYSWNKL ANLLFLESPA GVGFSYSNTT SDLYTAGDQR TAEDAYVFLV KWFERFPQYK HREFYIAGES YAGHYVPQLS QIVYEKRNPA
201: INFKGFIVGN AVIDDYHDYV GLFEYWWAHG LISDLTYHNL RITCEFGSSE HPSSKCTKAM EAADLEQGNI DPYSIYTVTC KKEAAALRSR FSRVRHPWMW
301: RAYDPCTEKY SGMYFNSPEV QKAMHANITG LAYPWKGCSD IVGEKWADSP LSMLPIYKEL IAAGLRIWVF SGDTDSVVPI TGTRYSIRAL KLQPLSKWYP
401: WNDDGQVGGW SQVYKGLTLV TIHGAGHEVP LFRPRRAFLL FQSFLDNKPL PM

Arabidopsis Description

SCPL26Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178VN35]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.