Factsheet for PGSC0003DMT400002249

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 8
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002245	Potato	cytosol	46.57	95.06
Solyc01g010710.2.1	Tomato	extracellular	91.33	92.45
Solyc01g010730.1.1	Tomato	extracellular, vacuole	15.12	81.52
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	60.48	62.63
VIT_14s0108g00110.t01	Wine grape	vacuole	59.68	53.82
PGSC0003DMT400076556	Potato	extracellular, vacuole	42.74	44.35
PGSC0003DMT400036974	Potato	extracellular, vacuole	40.12	43.74
PGSC0003DMT400074071	Potato	vacuole	40.12	43.64
PGSC0003DMT400063802	Potato	vacuole	41.53	42.83
PGSC0003DMT400066624	Potato	vacuole	9.88	40.5
PGSC0003DMT400063806	Potato	extracellular, vacuole	16.73	40.49
PGSC0003DMT400066638	Potato	mitochondrion	14.52	40.22
PGSC0003DMT400066630	Potato	nucleus, peroxisome, vacuole	25.81	36.47
PGSC0003DMT400066626	Potato	extracellular, vacuole	23.39	29.37

Protein Annotations

EntrezGene:102604487	MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674
GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058	UniProt:M0ZJU3	PFAM:PF00450
EnsemblPlantsGene:PGSC0003DMG401000860	PGSC:PGSC0003DMG401000860	EnsemblPlants:PGSC0003DMT400002249	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802
PANTHER:PTHR11802:SF84	InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
UniParc:UPI0002950116	RefSeq:XP_006363922.1	:	:	:	:

Description

Serine carboxypeptidase-like enzyme [Source:PGSC_GENE;Acc:PGSC0003DMG401000860]

Coordinates

chr1:-:13573203..13576975

Molecular Weight (calculated)

55660.8 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.158

Length

496 amino acids

Sequence
(BLAST)

001: MVPIWLCIFT IFSSFLFYKT SCELITSLPG QPPNIIFKQY SGYIITNSQH GRSLFYYFVE ADSENATSLP LTLWLNGGPG CSSVGFGAFM EHGPFQPGKD
101: GRLIKNKYSW NLESNMLYVE SPIGVGFSYS NTSSDYTNWD DVATAKENLQ FILNWLEKFP EYKNSELFLA GESYAGHYIP QLTILLLDYN RKPNVKPIKL
201: KSIALGNPLL DLEISVKSSE YLWSHGAISD ELLTMKRTIC NETRLLLESI HNNMSNECSE VWELTNEEMG SDTDMGDLLA PICVSSGAAG QLGVLGTLAT
301: IHKKDVRKIG DPCLTDRINM YLNKPEVQKA LHANTTHLPY AWDFCLGHLQ YQRGDLAINV IPLLSNILKE NIQVLLYSGD QDTKIPLTQT RKIAKLLARD
401: LKLVALDKYG PWYDDMQIGG WSQSYGGVIE GKNVTYLTFA TVRGAAHEVP YTSPSQALTL FRAFLKGQPP SRRNNTIRAN KLHNPIDMMN LFSIAI

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.