Factsheet for VIT_14s0108g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
vacuole 5
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	71.82	82.46
PGSC0003DMT400002249	Potato	vacuole	53.82	59.68
Solyc01g010710.2.1	Tomato	extracellular	52.91	59.39
Solyc01g010730.1.1	Tomato	extracellular, vacuole	9.82	58.7
Solyc01g010720.2.1	Tomato	cytosol	41.27	54.05
PGSC0003DMT400002245	Potato	cytosol	23.27	52.67
VIT_08s0040g01060.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	38.36	48.28
VIT_08s0040g01140.t01	Wine grape	vacuole	39.64	48.12
VIT_17s0000g00370.t01	Wine grape	vacuole	39.82	47.4
VIT_08s0040g01110.t01	Wine grape	vacuole	38.18	47.3
VIT_01s0244g00100.t01	Wine grape	vacuole	39.64	47.08
VIT_08s0040g01130.t01	Wine grape	endoplasmic reticulum, vacuole	37.09	45.43
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	38.36	44.51
VIT_18s0001g15550.t01	Wine grape	extracellular	36.73	43.25
VIT_08s0040g01070.t01	Wine grape	extracellular, vacuole	24.0	34.55
VIT_11s0037g00780.t01	Wine grape	plastid	10.91	28.44
VIT_08s0040g01040.t01	Wine grape	vacuole	36.18	25.03

Protein Annotations

EntrezGene:100261014	wikigene:100261014	MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
ProteinID:CBI22166	ProteinID:CBI22166.3	UniProt:D7SX69	EMBL:FN595239	GO:GO:0003674	GO:GO:0003824
GO:GO:0004180	GO:GO:0004185	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	EntrezGene:LOC100261014	wikigene:LOC100261014	PFAM:PF00450
PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF84	InterPro:Peptidase_S10	MEROPS:S10.005
SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	TIGR:TC67147	TMHMM:TMhelix	UniParc:UPI0001BE20EA	ArrayExpress:VIT_14s0108g00110
EnsemblPlantsGene:VIT_14s0108g00110	EnsemblPlants:VIT_14s0108g00110.t01	unigene:Vvi.25316	unigene:Vvi.808	RefSeq:XP_002277201	RefSeq:XP_002277201.1

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:D7SX69]

Coordinates

chr14:+:28916144..28920649

Molecular Weight (calculated)

62535.8 Da

IEP (calculated)

6.738

GRAVY (calculated)

-0.171

Length

550 amino acids

Sequence
(BLAST)

001: MIKETLLLIN LHASSNSNIK DQYFINKDVV YIYIYKALFS RTRKVQVKSS VFQQEPFPYN TIKVTLILYL VMALGFILEA ISFFLFQLYS KSFAELITAL
101: PGQPANVSFK QYSGYIATDD QHGRALFYYF VEAETAHPLS RPLTLWLNGG PGCSSLGFGA FMENGPFQPG ENGILVKNKH SWNIESNMLY VESPIGVGFS
201: YSNTSSNYFW NDTRTAEDNL RFIVNWFEEF PYYKDSELFL TGESYAGHYI PQLAALLVEY NKRPNIRPIK LKAIALGNPL LDLDISVLAG DYLWSHGAIS
301: DDTLLLEKTV CNDSKYLREY YHGQLSKECK DVFNRVLDEI SGDVEKGDLL MPKCLSSNSA QQFRLKGLQG KIYAEIDRRT RGTIPDPCLP DRIFTYLNNP
401: QVQKALHANT THLPYYWDFC SGPLVYQVDN LDMDLLPLIA YLLEQNIRIL LYSGDQDAKV PLTQTRLITN NLAKDLKLVP FTKYGTWYDK EQVGGWSQSF
501: GRLRDGMNLT LLTFATVRGA AHEVPFTSPS QALTLFKSFL SGSPPPRLHE

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.