Factsheet for VIT_08s0040g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 1
plastid 2
vacuole 5
extracellular 3
endoplasmic reticulum 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g01070.t01	Wine grape	extracellular, vacuole	71.71	84.29
VIT_08s0040g01060.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	61.92	63.62
VIT_08s0040g01140.t01	Wine grape	vacuole	63.47	62.91
VIT_08s0040g01110.t01	Wine grape	vacuole	61.25	61.94
VIT_01s0244g00100.t01	Wine grape	vacuole	61.69	59.83
VIT_17s0000g00370.t01	Wine grape	vacuole	58.35	56.71
VIT_08s0040g01040.t01	Wine grape	vacuole	94.65	53.46
KRG95070	Soybean	vacuole	43.65	52.41
KRH66738	Soybean	nucleus	55.01	51.35
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	46.1	43.22
VIT_18s0001g15550.t01	Wine grape	extracellular	43.88	42.18
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	44.1	41.77
GSMUA_Achr11P...	Banana	extracellular	8.91	40.4
VIT_14s0108g00110.t01	Wine grape	vacuole	45.43	37.09
VIT_11s0037g00780.t01	Wine grape	plastid	11.58	24.64

Protein Annotations

EntrezGene:100255006	wikigene:100255006	EntrezGene:100256829	wikigene:100256829	MapMan:19.4.2.2	Gene3D:3.40.50.1820
InterPro:AB_hydrolase	EMBL:AM449245	ProteinID:CAN72076	ProteinID:CAN72076.1	ProteinID:CBI32795	ProteinID:CBI32795.3
UniProt:D7TQS5	EMBL:FN596008	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	EntrezGene:LOC100255006	wikigene:LOC100255006
EntrezGene:LOC100256829	wikigene:LOC100256829	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560
PANTHER:PTHR11802	PANTHER:PTHR11802:SF94	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS
SignalP:SignalP-noTM	TIGR:TC60150	UniParc:UPI0001BE3F8C	ArrayExpress:VIT_08s0040g01130	EnsemblPlantsGene:VIT_08s0040g01130	EnsemblPlants:VIT_08s0040g01130.t01
unigene:Vvi.15403	RefSeq:XP_002277400	RefSeq:XP_002277400.2	RefSeq:XP_002282978	RefSeq:XP_002282978.2	SEG:seg

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:D7TQS5]

Coordinates

chr8:+:12137642..12140264

Molecular Weight (calculated)

49748.7 Da

IEP (calculated)

5.639

GRAVY (calculated)

-0.185

Length

449 amino acids

Sequence
(BLAST)

001: MMILAAVCAA LVHFCSSAVE SHSAQADQIS SLPGQPRVSF QQFSGYITID EKQDRSFFYY FVEAENDTTT LKPLVVWFSG GPGCSSVGGG AFAQHGPFRP
101: SGDILLTNKY SWNREANMLY PESPAGTGFS YSANTSFYTN LNDEITARDN LVFLKNWFIK FPQYKNSELF IAGESYAGHF VPQLAQLILE SRVKFNLKGI
201: LMGDPLMDFD TNYNSVPHFY WSHGLISDST YNLFSSKCNY SRMNREQTSG SLSPACLAVR SQYSQEVGDS VDRFDVTLNS CLPSVDPQPQ VTENVDVCIG
301: DEVNKYLNRE DVQKSLHARL VGVANWSMCS GALRYNIKDK EITMIPVMGS LVKSGIRTFV YSGDQDSVIP LFGTRTLVDG LAKELRLNTT VPYRNWFEGE
401: QVGGWTQVYG DILSFATVRG GSHTVPGTQP ARALVLFTAF LKGQPPPAE

Best Arabidopsis Sequence Match ( AT2G33530.1 )
(BLAST)

001: MPRLQCLTMA TSLILLLQAL SLVSSTILSR ADRITRLPGQ PRVGFQQYSG YVTIDEKKQR ALFYYLAEAE TKPISKPLVL WLNGGPGCSS LGVGAFSENG
101: PFRPKGSILV RNQHSWNQEA NMLYLETPVG VGFSYANESS SYEGVNDKIT AKDNLVFLQK WFLKFPQYLN RSLFITGESY AGHYVPQLAQ LMIQYNKKHN
201: LFNLKGIAIG NPVMEFATDF NSRAEYFWSH GLISDPTYKL FTSSCNYSRF LSEYHRGSVS SMCTKVLSQV GIETSRFIDK YDVTLDVCIP SVLSQSKVVS
301: PQPQQVGETV DVCLEDETVN YLNRRDVQKA LHARLVGTRK WTVCSDVLDY EVLDVEVPTI NIVGSLVKAG VPVFVYSGDQ DSVIPLTGSR TLVKRLAEEL
401: GLRTTVPYRV WFAGQQVGGW TQVYGNTLAF ATVRGAAHEV PFSQPARALV LFKAFLGGRP LPEEF

Arabidopsis Description

SCPL46Serine carboxypeptidase-like 46 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY01]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.