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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 4
  • vacuole 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG95070 Soybean vacuole 65.28 83.96
KRH00258 Soybean vacuole 13.31 68.09
KRG95071 Soybean vacuole 57.8 60.17
KRG95073 Soybean extracellular, vacuole 56.55 59.13
KRH66741 Soybean extracellular, vacuole 56.76 59.09
KRH66743 Soybean extracellular 56.13 58.82
KRH66744 Soybean vacuole 55.3 57.7
KRH33130 Soybean nucleus 55.3 57.33
VIT_08s0040g01060.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 51.77 56.98
VIT_08s0040g01110.t01 Wine grape vacuole 51.77 56.08
KRH01514 Soybean vacuole 53.64 55.97
KRH30802 Soybean vacuole 21.0 55.49
KRH45206 Soybean plasma membrane 53.01 55.31
VIT_08s0040g01130.t01 Wine grape endoplasmic reticulum, vacuole 51.35 55.01
KRH63848 Soybean nucleus 53.22 54.58
KRH54117 Soybean nucleus, vacuole 52.6 53.83
KRH41079 Soybean vacuole 51.98 52.74
VIT_08s0040g01070.t01 Wine grape extracellular, vacuole 35.55 44.76
KRH53391 Soybean extracellular, vacuole 41.37 42.07
KRH64547 Soybean extracellular, vacuole 41.37 42.07
KRH15957 Soybean nucleus 40.54 40.04
KRH63258 Soybean mitochondrion 11.43 39.86
KRH44745 Soybean cytosol, nucleus, vacuole 8.52 37.27
KRG98789 Soybean cytosol, mitochondrion 10.19 36.57
GSMUA_Achr11P... Banana extracellular 7.48 36.36
KRH30255 Soybean peroxisome 14.97 33.03
VIT_08s0040g01040.t01 Wine grape vacuole 49.9 30.19
KRH02406 Soybean cytosol 21.62 30.06
Protein Annotations
MapMan:19.4.2.2Gene3D:3.40.50.12670Gene3D:3.40.50.1820InterPro:AB_hydrolaseEMBL:ACUP02002008EnsemblPlantsGene:GLYMA_03G125200
GO:GO:0003674GO:GO:0003824GO:GO:0004180GO:GO:0004185GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019538
GO:GO:0051603UniProt:I1JN31InterPro:IPR029058EnsemblPlants:KRH66738ProteinID:KRH66738ProteinID:KRH66738.1
PFAM:PF00450PRINTS:PR00724ScanProsite:PS00131PANTHER:PTHR11802PANTHER:PTHR11802:SF97InterPro:Peptidase_S10
MEROPS:S10.005SUPFAM:SSF53474InterPro:Ser_caboxypep_ser_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002339D49
Description
hypothetical protein
Coordinates
chr3:+:33883327..33887351
Molecular Weight (calculated)
54513.0 Da
IEP (calculated)
8.286
GRAVY (calculated)
-0.208
Length
481 amino acids
Sequence
(BLAST)
001: MFPQPWIFLI ATIIAISLFM SSLVESFPVA DKVKSLPEQS PVSFQQFAGF VPVDDKNQRA LFYYFVEAET NPASKPLVLW LNGGPGCTSV GVGAFTEHGP
101: FVTNQGEAIE KNQYSWNKEA NILYLESPAG VGFSYSLNLS FYKTLNDEIT ARDSLVFLRR WFAKFPEYKN RDFYITGESY GGHYVPQLAE LIIKSKVNFN
201: LKGIAIGNPL LDFDTDMNAV DEYYWSHGII SDYAYKIRTS LCNSSRVLRE YFSGQISKDC LVAAQKVSEE YSFTNFIDPY YVVGEKCLSY NVSQAGFLRE
301: TLNSGMFQFR NSHYVLQTEE PDQQVDECNL KYSEMYLNRK DVQKALHARL EGTTKYRLCS KIVQTNYDPL NREIPTINVV GFLVKSGLRV IVYSGDQDSV
401: IPFMGTRRLV DRLAKTLGLK TTLPYSAWFV DKQVGGWTKV YGNHLTYTTI RGASHGTPAT QPKRSFVLFN AFLQGKPLPK A
Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)
001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F
Arabidopsis Description
SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.