CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
vacuole 1
nucleus 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54117	Soybean	nucleus, vacuole	81.16	23.83
KRH63848	Soybean	nucleus	78.99	23.24
KRH41079	Soybean	vacuole	74.64	21.73
KRH01514	Soybean	vacuole	58.7	17.57
KRH45206	Soybean	plasma membrane	57.97	17.35
KRG95071	Soybean	vacuole	52.17	15.58
KRG95073	Soybean	extracellular, vacuole	50.0	15.0
KRH66744	Soybean	vacuole	50.0	14.97
KRH33130	Soybean	nucleus	50.0	14.87
KRH66743	Soybean	extracellular	49.28	14.81
KRH66741	Soybean	extracellular, vacuole	48.55	14.5
KRH66738	Soybean	nucleus	39.86	11.43
KRG95070	Soybean	vacuole	27.54	10.16
KRH64547	Soybean	extracellular, vacuole	28.26	8.25
KRH53391	Soybean	extracellular, vacuole	26.81	7.82
KRH15957	Soybean	nucleus	26.81	7.6
KRH30802	Soybean	vacuole	6.52	4.95
VIT_11s0037g00780.t01	Wine grape	plastid	7.25	4.74
KRH44745	Soybean	cytosol, nucleus, vacuole	2.9	3.64
KRH02406	Soybean	cytosol	7.97	3.18
KRH30255	Soybean	peroxisome	0.72	0.46
KRH00258	Soybean	vacuole	0.0	0.0
KRG98789	Soybean	cytosol, mitochondrion	0.0	0.0
CDY68103	Canola	vacuole	0.0	0.0
CDY34806	Canola	vacuole	0.0	0.0
CDX76846	Canola	vacuole	0.0	0.0

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02002651	EnsemblPlantsGene:GLYMA_04G163900	GO:GO:0003674
GO:GO:0003824	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR029058	UniProt:K7KKK0	EnsemblPlants:KRH63258	ProteinID:KRH63258	ProteinID:KRH63258.1
PFAM:PF00450	PANTHER:PTHR11802	PANTHER:PTHR11802:SF123	InterPro:Peptidase_S10	SUPFAM:SSF53474	UniParc:UPI000295C838

Description

hypothetical protein

Coordinates

chr4:-:40730419..40731291

Molecular Weight (calculated)

15966.4 Da

IEP (calculated)

7.840

GRAVY (calculated)

-0.156

Length

138 amino acids

Sequence
(BLAST)

001: MFTRVCNYSR YVMSQVNRET RKFMHKYDVT LDVCISLVLS QSKVICPQSQ EENESIDVCK DDKVTNYLNW RDVQEKLHAK LVGVRKWDVC SNNILDYDML
101: NLEVPTLLVV GSLIKFGVKV LIYNGNQDFV IPLTGSRP

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.