CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34806	Canola	vacuole	94.12	93.33
CDY68103	Canola	vacuole	57.98	35.57
VIT_11s0037g00780.t01	Wine grape	plastid	30.25	17.06
CDY21525	Canola	vacuole	26.05	15.66
CDY19500	Canola	vacuole	35.29	9.07
CDX81435	Canola	cytosol	31.09	8.96
CDY70042	Canola	vacuole	33.61	8.91
CDY17183	Canola	endoplasmic reticulum, vacuole	34.45	8.87
CDX93108	Canola	vacuole	32.77	8.69
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	31.93	8.62
CDY46627	Canola	vacuole	32.77	8.59
CDY39011	Canola	vacuole	30.25	8.57
CDY61693	Canola	vacuole	32.77	8.55
CDX80725	Canola	extracellular, vacuole	32.77	8.19
CDY37202	Canola	extracellular	31.09	8.11
CDY48945	Canola	extracellular, vacuole	31.93	7.97
CDY23340	Canola	vacuole	31.09	7.89
CDY66139	Canola	extracellular	31.93	7.82
CDX90124	Canola	vacuole	29.41	7.61
CDY11750	Canola	endoplasmic reticulum, vacuole	29.41	7.59
CDY65614	Canola	extracellular, vacuole	3.36	1.37
CDY21526	Canola	peroxisome	1.68	0.68
CDY66771	Canola	cytosol	0.0	0.0
KRH63258	Soybean	mitochondrion	0.0	0.0

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	GO:A0A078CI08	InterPro:AB_hydrolase	EnsemblPlants:CDX76846	ProteinID:CDX76846
ProteinID:CDX76846.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00127353001	InterPro:IPR029058	PFAM:PF00450
PANTHER:PTHR11802	PANTHER:PTHR11802:SF87	InterPro:Peptidase_S10	SUPFAM:SSF53474	SignalP:SignalP-noTM	UniParc:UPI0004EECF04
SEG:seg	:	:	:	:	:

Description

BnaC08g34320D

Coordinates

chrLK031808:-:1388482..1392830

Molecular Weight (calculated)

13137.6 Da

IEP (calculated)

9.766

GRAVY (calculated)

-0.150

Length

119 amino acids

Sequence
(BLAST)

001: MARTHLFLFL LVLSSSRLSS AATTVSSSSL SREQEEDRIE ALPGQPKVGF SQFSGYVTVN ESHGRSLFYW LTESSSSPHT KPLLLWLNGV KHAIFVMKQT
101: KENMQLSFSG NNGVSLTAN

Best Arabidopsis Sequence Match ( AT2G24000.2 )
(BLAST)

001: MARTHLLFLL FVLLSLATSS TSTKEQEEDR IKALPGQPKV GFSQFSGYVT VNESHGRSLF YWLTESSSHS PHTKPLLLWL NGGPGCSSIA YGASEEIGPF
101: RISKTGCNLY LNNFSWNTGH YVPQLAQKIH EYNNAYKNPV INLKGFMVGN PEMDKNNDRL GTITYWWSHA MISDASYNRI LKNCDFTADR FSKECDSAIY
201: VAAADFGDID QYSIYTPKCV PPQDQTNQTK FEQMMQMHTT KRFLEDQYDP CTENYAEIYY NRPEVQRAMH ANHTAIPYKW TACSDSVFNN WNWRDSDNSM
301: LPIYKELIAA GLRIWVYSGD TDSVIPVTAT RYSLGKLNLR VKTRWYPWYS GNQVGGRTEV YEGLTFVTVR GAGHEVPFFQ PQSALILLRS FLAGNELSRS
401: Y

Arabidopsis Description

SCPL22Serine carboxypeptidase-like 22 [Source:UniProtKB/Swiss-Prot;Acc:Q1PF08]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.