Factsheet for VIT_11s0037g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76846	Canola	vacuole	17.06	30.25
CDY34806	Canola	vacuole	17.06	30.0
CDY68103	Canola	vacuole	22.75	24.74
VIT_08s0040g01110.t01	Wine grape	vacuole	29.38	13.96
VIT_08s0040g01060.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	28.44	13.73
VIT_01s0244g00100.t01	Wine grape	vacuole	29.38	13.39
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	29.38	13.08
VIT_17s0000g00370.t01	Wine grape	vacuole	28.44	12.99
VIT_08s0040g01140.t01	Wine grape	vacuole	27.49	12.8
VIT_18s0001g15550.t01	Wine grape	extracellular	26.07	11.78
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	26.54	11.69
VIT_08s0040g01130.t01	Wine grape	endoplasmic reticulum, vacuole	24.64	11.58
VIT_14s0108g00110.t01	Wine grape	vacuole	28.44	10.91
VIT_08s0040g01070.t01	Wine grape	extracellular, vacuole	13.74	7.59
KRH63258	Soybean	mitochondrion	4.74	7.25
VIT_08s0040g01040.t01	Wine grape	vacuole	27.01	7.17

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	ProteinID:CCB59784	ProteinID:CCB59784.1	UniProt:F6HYM0
EMBL:FN596499	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185	GO:GO:0005575	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	PFAM:PF00450	PANTHER:PTHR11802
PANTHER:PTHR11802:SF32	InterPro:Peptidase_S10	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000210AA6F	ArrayExpress:VIT_11s0037g00780
EnsemblPlantsGene:VIT_11s0037g00780	EnsemblPlants:VIT_11s0037g00780.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr11:+:9288160..9295060

Molecular Weight (calculated)

23845.8 Da

IEP (calculated)

8.282

GRAVY (calculated)

0.055

Length

211 amino acids

Sequence
(BLAST)

001: MHMSIANPSS IHIYSPPSLI SSSSSTSKTP QKWRCPKWAF VVQILLTLIN LNRATSSSSS DPLVQQELDK VLQLPGQTFN ISFAHYAGYV TVNEYTGRAL
101: FYWLIEAAED PSSKPLVLWL NGGRLLPNTL YRETKMVNTI YEAASKKNRL SMASDVKECC TMVFLSFSLS SLYIYIYILT SILEKDLDLQ YCITSKVVIL
201: ESEQLIFNGK Y

Best Arabidopsis Sequence Match ( AT4G30810.1 )
(BLAST)

001: MAKTRGSCCL VNALIAIAFL ATAHLCEAGL SQKEQDKVSK LPGQNFNVSF AHYSGFVATN EQLGRALFYW LFEAVEDAKS KPLVLWLNGG PGCSSVAYGE
101: AEEIGPFHIK ADGKTLYLNQ YSWNQAANIL FLDAPVGVGY SYSNTSSDLK SNGDKRTAED SLKFLLKWVE RFPEYKGRDF YIVGESYAGH YIPQLSEAIV
201: KHNQGSDKNS INLKGYMVGN GLMDDFHDRL GLFQYIWSLG FISDQTYSLL QLQCGFESFI HSSKQCNKIL EIADKEIGNI DQYSVFTPAC VANASQSNML
301: LKKRPMTSRV SEQYDPCTEK HTTVYFNLPE VQKALHVPPG LAPSKWDTCS DVVSEHWNDS PSSVLNIYHE LIAAGLRIWV FSGDADAVVP VTSTRYSIDA
401: LNLRPLSAYG PWYLDGQVGG WSQQYAGLNF VTVRGAGHEV PLHRPKQALA LFKAFISGTP LSTHENSISR DMSELVSDS

Arabidopsis Description

SCPL29Serine carboxypeptidase-like 29 [Source:UniProtKB/Swiss-Prot;Acc:Q949Q7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.