Factsheet for VIT_18s0001g15550.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 23391302

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g064760.2.1	Tomato	nucleus	81.8	81.8
KRH64547	Soybean	extracellular, vacuole	81.58	80.55
KRH53391	Soybean	extracellular, vacuole	80.73	79.7
PGSC0003DMT400063802	Potato	vacuole	81.58	79.21
KRH15957	Soybean	nucleus	81.8	78.44
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	75.37	74.26
Os11t0213600-01	Rice	plasma membrane	73.02	73.33
TraesCS4D01G103600.1	Wheat	vacuole	73.02	72.25
TraesCS4B01G106700.1	Wheat	vacuole	72.81	72.19
TraesCS4A01G202600.1	Wheat	vacuole	72.81	72.03
Zm00001d004691_P001	Maize	vacuole	71.73	70.82
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	72.16	70.8
TraesCS4B01G264700.1	Wheat	vacuole	70.88	70.28
TraesCS4D01G264700.1	Wheat	vacuole	70.24	69.64
Zm00001d049055_P001	Maize	vacuole	71.95	67.74
TraesCS4A01G043900.1	Wheat	vacuole	64.24	67.57
HORVU4Hr1G016730.17	Barley	plastid	74.09	66.03
GSMUA_Achr8P29460_001	Banana	vacuole	74.95	65.67
GSMUA_Achr6P29260_001	Banana	plasma membrane	64.88	64.06
VIT_08s0040g01140.t01	Wine grape	vacuole	46.68	48.12
VIT_01s0244g00100.t01	Wine grape	vacuole	46.68	47.08
VIT_17s0000g00370.t01	Wine grape	vacuole	45.4	45.89
VIT_08s0040g01060.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	41.76	44.62
VIT_08s0040g01110.t01	Wine grape	vacuole	41.97	44.14
VIT_08s0040g01130.t01	Wine grape	endoplasmic reticulum, vacuole	42.18	43.88
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	42.83	41.75
VIT_14s0108g00110.t01	Wine grape	vacuole	43.25	36.73
VIT_08s0040g01070.t01	Wine grape	extracellular, vacuole	28.05	34.29
VIT_11s0037g00780.t01	Wine grape	plastid	11.78	26.07
VIT_08s0040g01040.t01	Wine grape	vacuole	40.47	23.77

Protein Annotations

EntrezGene:100262647	wikigene:100262647	MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	ProteinID:CBI19968
ProteinID:CBI19968.3	UniProt:E0CQN9	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180
GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	EntrezGene:LOC100262647
wikigene:LOC100262647	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20
InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	UniParc:UPI00015C7E4B
ArrayExpress:VIT_18s0001g15550	EnsemblPlantsGene:VIT_18s0001g15550	EnsemblPlants:VIT_18s0001g15550.t01	unigene:Vvi.22251	RefSeq:XP_002278193	RefSeq:XP_002278193.1
SEG:seg	:	:	:	:	:

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:E0CQN9]

Coordinates

chr18:-:13667832..13671220

Molecular Weight (calculated)

52305.2 Da

IEP (calculated)

6.319

GRAVY (calculated)

-0.114

Length

467 amino acids

Sequence
(BLAST)

001: MGRWWFWALF GVVLVLSVNG YPEEDLVVRL PGQPEVGFRQ FAGYVDVDVK AGRSLFYYFV EAEDDPDTKA LTLWLNGGPG CSSMGGGAFT ELGPFFPSGD
101: GRGLRRNSKS WNKASNLLFV ESPAGVGWSY SNTTSDYTCG DASTARDMRV FMMKWLEKFP AFKSRALFLT GESYAGHYIP QLAVALLDYN SHSTGFKFNL
201: KGVAIGNPLL RLDRDSAATY EFFWSHGMIS DEIGLTITKE CDFDDYVYAS PHNVSFSCNQ ALSEANSIVG EYINNYDVIL DVCYPAIVEQ ELRLRRMATK
301: MSVGIDVCMT YERSFYFNLP EVQKALHANR TGLNYRWTMC SGVLNYSETD GNIDILPLLK RIVQNSIPVW VFSGDQDSVV PLLGSRTLIR ELAQEMKFKI
401: TVPFGAWFHK GQVGGWATEY GNLLTFATVR GAAHMVPYAQ PSRALHLFSS FVRGRRLPNT TRPSIDD

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.