Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 7
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063802 | Potato | vacuole | 98.5 | 95.63 |
| VIT_18s0001g15550.t01 | Wine grape | extracellular | 81.8 | 81.8 |
| KRH64547 | Soybean | extracellular, vacuole | 79.87 | 78.86 |
| KRH53391 | Soybean | extracellular, vacuole | 79.66 | 78.65 |
| KRH15957 | Soybean | nucleus | 81.58 | 78.23 |
| Solyc01g104850.2.1 | Tomato | extracellular, vacuole | 73.45 | 71.76 |
| Solyc10g054090.1.1 | Tomato | extracellular | 12.63 | 62.77 |
| Solyc03g118370.2.1 | Tomato | extracellular | 44.33 | 45.49 |
| Solyc01g010710.2.1 | Tomato | extracellular | 43.25 | 41.22 |
| Solyc01g010720.2.1 | Tomato | cytosol | 36.4 | 40.48 |
| Solyc01g010730.1.1 | Tomato | extracellular, vacuole | 7.49 | 38.04 |
Protein Annotations
| MapMan:19.4.2.2 | Gene3D:3.40.50.12670 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004180 | GO:GO:0004185 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | InterPro:IPR029058 |
| UniProt:K4BT67 | PFAM:PF00450 | PRINTS:PR00724 | ScanProsite:PS00131 | PANTHER:PTHR11802 | PANTHER:PTHR11802:SF20 |
| InterPro:Peptidase_S10 | MEROPS:S10.005 | SUPFAM:SSF53474 | InterPro:Ser_caboxypep_ser_AS | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc04g064760.2 |
| EnsemblPlants:Solyc04g064760.2.1 | UniParc:UPI0002766464 | SEG:seg | : | : | : |
Description
Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:K4BT67]
Coordinates
chr4:-:55900970..55905052
Molecular Weight (calculated)
52343.6 Da
IEP (calculated)
7.336
GRAVY (calculated)
-0.200
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVWWFCGLV ILGLVIGGKG YPEKDLVKAL PGQPKVGFRQ YAGYVDVDVK AGRSLFYYFV EAEVKPDEKP LTLWLNGGPG CSSIGGGAFT ELGPFFPTGD
101: GRGLRRNSKS WNKASNLLFV ESPAGVGWSY SNTSSDYTTG DAKTAMDMHM FMMEWVKKFP AFKSRELYLT GESYAGHYIP QLAAALLDHN EHSKEYKFNI
201: KGVAIGNPLL RLDRDVPATY EYFWSHGMIS DEVGLTIMNQ CDFDDYTFGS PHNVSQACNN AISEANTIVG EYINNYDVIL DVCYPSIVEQ ELRLKKMATK
301: ISVGVDVCMS YERRFYFNLP EVQKALHANR TNLPYTWSMC SNVLKYSDTD GNINILPLLK RIIEKHIPVW IFSGDQDSVV PLLGSRTLVR ELAHDMGFKI
401: TVPYGAWFHK GQVGGWQTEY GNLLTFATVR GAAHMVPYAQ PARALHLFSS FIRGRRLPNN TRPSIDD
101: GRGLRRNSKS WNKASNLLFV ESPAGVGWSY SNTSSDYTTG DAKTAMDMHM FMMEWVKKFP AFKSRELYLT GESYAGHYIP QLAAALLDHN EHSKEYKFNI
201: KGVAIGNPLL RLDRDVPATY EYFWSHGMIS DEVGLTIMNQ CDFDDYTFGS PHNVSQACNN AISEANTIVG EYINNYDVIL DVCYPSIVEQ ELRLKKMATK
301: ISVGVDVCMS YERRFYFNLP EVQKALHANR TNLPYTWSMC SNVLKYSDTD GNINILPLLK RIIEKHIPVW IFSGDQDSVV PLLGSRTLVR ELAHDMGFKI
401: TVPYGAWFHK GQVGGWQTEY GNLLTFATVR GAAHMVPYAQ PARALHLFSS FIRGRRLPNN TRPSIDD
001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE
Arabidopsis Description
SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.