Factsheet for Solyc01g104850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 1
vacuole 7
extracellular 5
endoplasmic reticulum 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076556	Potato	extracellular, vacuole	94.35	94.35
Solyc04g064760.2.1	Tomato	nucleus	71.76	73.45
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	71.97	72.57
AT5G42240.1	Thale cress	vacuole	71.76	72.52
CDY66771	Canola	cytosol	16.53	68.7
AT2G12480.3	Thale cress	vacuole	67.15	68.59
Bra034921.1-P	Field mustard	extracellular, vacuole	67.99	68.13
CDY48945	Canola	extracellular, vacuole	67.99	68.13
Bra013152.1-P	Field mustard	vacuole	65.9	67.6
CDX80725	Canola	extracellular, vacuole	67.15	67.44
CDX81435	Canola	cytosol	57.74	66.83
CDY70042	Canola	vacuole	62.76	66.82
AT1G43780.1	Thale cress	extracellular, vacuole	66.95	66.81
AT5G42230.2	Thale cress	extracellular, vacuole	65.48	66.74
CDX93108	Canola	vacuole	62.55	66.59
Bra040939.1-P	Field mustard	extracellular, vacuole	65.06	66.31
Bra037202.1-P	Field mustard	extracellular	64.44	65.67
CDY23340	Canola	vacuole	63.81	65.03
CDY66139	Canola	extracellular	64.85	63.79
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	58.79	63.72
Bra022715.1-P	Field mustard	extracellular	53.14	63.34
CDY37202	Canola	extracellular	58.37	61.18
Solyc10g054090.1.1	Tomato	extracellular	11.09	56.38
Solyc03g118370.2.1	Tomato	extracellular	43.51	45.71
Solyc01g010710.2.1	Tomato	extracellular	44.35	43.27
Solyc01g010730.1.1	Tomato	extracellular, vacuole	7.95	41.3
Solyc01g010720.2.1	Tomato	cytosol	35.56	40.48

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058
UniProt:K4B257	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20
InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	EnsemblPlantsGene:Solyc01g104850.2	EnsemblPlants:Solyc01g104850.2.1
UniParc:UPI0002768B8B	SEG:seg	:	:	:	:

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:K4B257]

Coordinates

chr1:+:93178946..93183022

Molecular Weight (calculated)

54660.0 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.295

Length

478 amino acids

Sequence
(BLAST)

001: MGDMHYFRLF VFIIIFSIGN GQYYYPIEDL VENLPGQPKV GFRQYAGYVD VDEKAGRSLF YYFVEAEKDA HNLPLTLWLN GGPGCSSIGG GAFTELGPFF
101: PRGDGHGLRR NTKSWNKVSN LLFIESPVGV GWSYSNTSSD YTSGDESTAK DMLNFMLKWY EKFSELKSRP LFLTGESYAG HYIPQLANGI LDYNKQSKDF
201: KFNLKGVAIG NPLLRLDRDV PAMYEYYWSH GMISDELFLI IKENCDFDDY EFPLPHNVSI TCNQAIDEAY KLVTDYVNVY DVILDVCYPS IVQQELRLHK
301: QVTKMSMGVD VCMTSERYFY FNLPEVQKAL HANRTNLPYE WRMCSDRLNY SQSDGDIDML PSLKNIIQHD VPLWIFSGDQ DSVVPLVGSR TLVRELARDL
401: KFKTTVPYGA WFHKGQVGGW QIEYGEKLTF ATVRGAAHMV PYAQPSRALH LFTTFVHGKR LPNTTRIPIN SSSNLNNY

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.