Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- vacuole 5
- plasma membrane 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G42240.1 | Thale cress | vacuole | 78.04 | 77.38 |
| AT2G12480.3 | Thale cress | vacuole | 73.56 | 73.72 |
| Bra013152.1-P | Field mustard | vacuole | 72.71 | 73.18 |
| CDY70042 | Canola | vacuole | 69.94 | 73.05 |
| CDX93108 | Canola | vacuole | 69.3 | 72.38 |
| CDX81435 | Canola | cytosol | 63.11 | 71.67 |
| Bra040939.1-P | Field mustard | extracellular, vacuole | 71.22 | 71.22 |
| Bra037202.1-P | Field mustard | extracellular | 71.0 | 71.0 |
| CDY23340 | Canola | vacuole | 70.36 | 70.36 |
| CDY51660 | Canola | endoplasmic reticulum, extracellular, vacuole | 65.46 | 69.61 |
| CDY66139 | Canola | extracellular | 71.22 | 68.72 |
| Bra022715.1-P | Field mustard | extracellular | 58.21 | 68.08 |
| AT1G43780.1 | Thale cress | extracellular, vacuole | 68.66 | 67.22 |
| VIT_12s0055g00820.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 67.59 | 66.88 |
| CDY37202 | Canola | extracellular | 64.39 | 66.23 |
| Os11t0213600-01 | Rice | plasma membrane | 65.46 | 66.02 |
| PGSC0003DMT400076556 | Potato | extracellular, vacuole | 66.95 | 65.69 |
| TraesCS4B01G106700.1 | Wheat | vacuole | 65.88 | 65.61 |
| Solyc01g104850.2.1 | Tomato | extracellular, vacuole | 66.74 | 65.48 |
| TraesCS4D01G103600.1 | Wheat | vacuole | 65.88 | 65.47 |
| TraesCS4A01G202600.1 | Wheat | vacuole | 65.67 | 65.25 |
| CDY66771 | Canola | cytosol | 15.99 | 65.22 |
| EES08376 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 65.67 | 64.71 |
| TraesCS4D01G264700.1 | Wheat | vacuole | 64.61 | 64.33 |
| Zm00001d004691_P001 | Maize | vacuole | 64.82 | 64.27 |
| TraesCS4A01G043900.1 | Wheat | vacuole | 60.77 | 64.19 |
| TraesCS4B01G264700.1 | Wheat | vacuole | 64.18 | 63.91 |
| Zm00001d049055_P001 | Maize | vacuole | 65.46 | 61.9 |
| HORVU4Hr1G016730.17 | Barley | plastid | 66.52 | 59.54 |
| GSMUA_Achr8P29460_001 | Banana | vacuole | 67.38 | 59.29 |
| GSMUA_Achr6P29260_001 | Banana | plasma membrane | 59.49 | 58.99 |
| AT1G28110.2 | Thale cress | vacuole | 44.14 | 44.9 |
| AT2G33530.1 | Thale cress | extracellular, vacuole | 43.92 | 44.3 |
| AT3G52010.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 37.95 | 36.55 |
| AT3G56540.1 | Thale cress | vacuole | 20.47 | 36.36 |
Protein Annotations
| MapMan:19.4.2.2 | Gene3D:3.40.50.1820 | EntrezGene:834228 | InterPro:AB_hydrolase | ProteinID:AED94783.1 | ProteinID:ANM70035.1 |
| ArrayExpress:AT5G42230 | EnsemblPlantsGene:AT5G42230 | RefSeq:AT5G42230 | TAIR:AT5G42230 | RefSeq:AT5G42230-TAIR-G | EnsemblPlants:AT5G42230.2 |
| ProteinID:BAB10196.1 | EMBL:BT002948 | EMBL:BT004386 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004180 |
| GO:GO:0004185 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 |
| InterPro:IPR029058 | RefSeq:NP_001318730.1 | RefSeq:NP_199038.1 | PFAM:PF00450 | PRINTS:PR00724 | ScanProsite:PS00131 |
| PANTHER:PTHR11802 | PANTHER:PTHR11802:SF20 | InterPro:Peptidase_S10 | UniProt:Q9FH06 | MEROPS:S10.A22 | SUPFAM:SSF53474 |
| InterPro:Ser_caboxypep_ser_AS | UniParc:UPI000000BE55 | Symbol:scpl41 | SEG:seg | : | : |
Description
SCPL41Serine carboxypeptidase-like 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH06]
Coordinates
chr5:+:16880592..16884462
Molecular Weight (calculated)
52543.9 Da
IEP (calculated)
7.591
GRAVY (calculated)
-0.084
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIVSLRDVA MVMVTVQVFA RGYPETDLVV RLPGQPKVVF RQYAGYVDLD LNAGRSLFYY FVEAEKHPDT KPLTLWLNGG PGCSSVGGGA FTELGPFYPT
101: GYGRGLRINS MSWNKASNLL FVDSPAGVGW SYSNRSSDYN AGDKSAASDM LVFLLRWFDK FPELKSHDLF LTGESYAGHY IPQLADAILS YNSRSSGFKF
201: NIKGIAIGNP LLKLDRDIPA VYEFFWSHGM ISEVVGRTIK IQCDFSHYTY AYPHNVSDAC NDAIREAGDI TTEYVNTFDV LPDLCYPSIA LQELRLKQMA
301: TKMSMGVDVC MNYERQFYLN IPEVQMALHA NRTNLPYSWS LCSNLLNYSA IDVNTNMLPT LKRIIQNKIP VRIFSGDQDS VVPFLGTRTI VGELANDLNF
401: KTTVPYGVWF HKRQVGGWAI EYGNLLTFAT VRGAAHAVAY TQPSRALHLF STFLRGQRLP NKTDIAMHD
101: GYGRGLRINS MSWNKASNLL FVDSPAGVGW SYSNRSSDYN AGDKSAASDM LVFLLRWFDK FPELKSHDLF LTGESYAGHY IPQLADAILS YNSRSSGFKF
201: NIKGIAIGNP LLKLDRDIPA VYEFFWSHGM ISEVVGRTIK IQCDFSHYTY AYPHNVSDAC NDAIREAGDI TTEYVNTFDV LPDLCYPSIA LQELRLKQMA
301: TKMSMGVDVC MNYERQFYLN IPEVQMALHA NRTNLPYSWS LCSNLLNYSA IDVNTNMLPT LKRIIQNKIP VRIFSGDQDS VVPFLGTRTI VGELANDLNF
401: KTTVPYGVWF HKRQVGGWAI EYGNLLTFAT VRGAAHAVAY TQPSRALHLF STFLRGQRLP NKTDIAMHD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.