Factsheet for Zm00001d049055_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	88.51	92.23
Zm00001d004691_P001	Maize	vacuole	85.89	90.06
Os11t0213600-01	Rice	plasma membrane	81.85	87.31
TraesCS4A01G202600.1	Wheat	vacuole	81.25	85.38
TraesCS4B01G106700.1	Wheat	vacuole	81.05	85.35
TraesCS4D01G103600.1	Wheat	vacuole	81.05	85.17
TraesCS4D01G264700.1	Wheat	vacuole	78.23	82.38
TraesCS4B01G264700.1	Wheat	vacuole	78.02	82.17
TraesCS4A01G043900.1	Wheat	vacuole	72.58	81.08
HORVU4Hr1G016730.17	Barley	plastid	81.65	77.29
KRH64547	Soybean	extracellular, vacuole	69.76	73.15
KRH53391	Soybean	extracellular, vacuole	69.56	72.94
VIT_18s0001g15550.t01	Wine grape	extracellular	67.74	71.95
PGSC0003DMT400063802	Potato	vacuole	68.55	70.69
KRH15957	Soybean	nucleus	69.35	70.64
AT5G42240.1	Thale cress	vacuole	66.94	70.19
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	65.52	68.57
Bra034921.1-P	Field mustard	extracellular, vacuole	65.73	68.34
CDX80725	Canola	extracellular, vacuole	65.52	68.28
CDY48945	Canola	extracellular, vacuole	65.52	68.13
Bra013152.1-P	Field mustard	vacuole	63.71	67.81
GSMUA_Achr8P29460_001	Banana	vacuole	72.78	67.73
PGSC0003DMT400076556	Potato	extracellular, vacuole	65.12	67.57
CDX93108	Canola	vacuole	60.69	67.04
CDY70042	Canola	vacuole	60.69	67.04
AT2G12480.3	Thale cress	vacuole	62.3	66.03
CDX81435	Canola	cytosol	54.64	65.62
AT5G42230.2	Thale cress	extracellular, vacuole	61.9	65.46
AT1G43780.1	Thale cress	extracellular, vacuole	63.1	65.34
GSMUA_Achr6P29260_001	Banana	plasma membrane	61.49	64.48
Bra037202.1-P	Field mustard	extracellular	60.89	64.39
Bra040939.1-P	Field mustard	extracellular, vacuole	60.48	63.97
CDY66139	Canola	extracellular	62.1	63.37
CDY23340	Canola	vacuole	59.48	62.9
CDY66771	Canola	cytosol	14.31	61.74
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	54.84	61.68
Bra022715.1-P	Field mustard	extracellular	49.8	61.6
CDY37202	Canola	extracellular	55.04	59.87
Solyc10g054090.1.1	Tomato	extracellular	10.89	57.45
Zm00001d049276_P003	Maize	mitochondrion, vacuole	41.94	43.15
Zm00001d007372_P002	Maize	vacuole	42.74	42.57
Zm00001d003895_P001	Maize	vacuole	43.55	41.22
Zm00001d015872_P001	Maize	cytosol	10.28	34.69

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	UniProt:A0A1D6PS11	InterPro:AB_hydrolase	ProteinID:AQK49506.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058	PFAM:PF00450
PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10
SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0008427942
EnsemblPlantsGene:Zm00001d049055	EnsemblPlants:Zm00001d049055_P001	EnsemblPlants:Zm00001d049055_T001	SEG:seg	:	:

Description

Serine carboxypeptidase F13S12.6

Coordinates

chr4:+:14072313..14075871

Molecular Weight (calculated)

55428.0 Da

IEP (calculated)

6.718

GRAVY (calculated)

-0.068

Length

496 amino acids

Sequence
(BLAST)

001: MAASWRAVAL AVAAVGWLLA GAARAFPAED LVARLPGQPP VTFRQFAGYV DVDAKAGRSL FYYFAEARED AAAKPLTLWL NGGPGCSSVG GGAFTELGPF
101: YPRGDGRGLR LNKKSWNRAS NLLFVESPAG VGWSYSNTSS DYSTGDVRTA HDMYQFLLGW YAKFPEYRSR ALFLTGESYA GHYIPQLADV LITHNEKSKG
201: FKFNIKGVAI GNPLLKLDRD VPATYEYFWS HGMISDEIFL AISHSCDFED YTFNDPHNES KSCNDAIAEA NSVVGDYVNN YDVILDVCYP SIVMQELRLR
301: EYATKISIGV DVCMSYERFF YFNLPEVQQA LHANRTHLKH HWSMCSDILN YSNTDGNINI LPTLQRIVEH KIPLWVFSGD QDSVVPLLGT RTLVRELAHA
401: MGLHVTVPYS TWFHKGQPSL LIYAGVVYIY MNKILMQIEV FQVGGWVTEY GNFLTFATVR GASHMVPFAQ PDRALGLFRS IVLGQRLPNT TNPHID

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.