Factsheet for PGSC0003DMT400063802

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g064760.2.1	Tomato	nucleus	95.63	98.5
VIT_18s0001g15550.t01	Wine grape	extracellular	79.21	81.58
KRH64547	Soybean	extracellular, vacuole	77.34	78.65
KRH53391	Soybean	extracellular, vacuole	77.13	78.44
KRH15957	Soybean	nucleus	79.0	78.03
Os11t0213600-01	Rice	plasma membrane	72.14	74.62
TraesCS4B01G106700.1	Wheat	vacuole	72.56	74.1
TraesCS4A01G202600.1	Wheat	vacuole	72.56	73.94
TraesCS4D01G103600.1	Wheat	vacuole	72.56	73.94
PGSC0003DMT400076556	Potato	extracellular, vacuole	71.93	72.38
Zm00001d004691_P001	Maize	vacuole	71.1	72.3
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	71.31	72.06
PGSC0003DMT400063806	Potato	extracellular, vacuole	30.35	71.22
TraesCS4B01G264700.1	Wheat	vacuole	69.02	70.49
TraesCS4D01G264700.1	Wheat	vacuole	68.19	69.64
Zm00001d049055_P001	Maize	vacuole	70.69	68.55
HORVU4Hr1G016730.17	Barley	plastid	74.64	68.51
TraesCS4A01G043900.1	Wheat	vacuole	62.37	67.57
GSMUA_Achr8P29460_001	Banana	vacuole	72.35	65.29
GSMUA_Achr6P29260_001	Banana	plasma membrane	64.03	65.12
PGSC0003DMT400074071	Potato	vacuole	43.66	46.05
PGSC0003DMT400036974	Potato	extracellular, vacuole	43.45	45.93
PGSC0003DMT400066638	Potato	mitochondrion	16.63	44.69
PGSC0003DMT400002249	Potato	vacuole	42.83	41.53
PGSC0003DMT400066624	Potato	vacuole	10.39	41.32
PGSC0003DMT400066630	Potato	nucleus, peroxisome, vacuole	29.31	40.17
PGSC0003DMT400002245	Potato	cytosol	17.88	35.39
PGSC0003DMT400066626	Potato	extracellular, vacuole	23.7	28.86

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058	UniProt:M1CB97	PFAM:PF00450	EnsemblPlantsGene:PGSC0003DMG400024802
PGSC:PGSC0003DMG400024802	EnsemblPlants:PGSC0003DMT400063802	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20
InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	UniParc:UPI00029626BF
SEG:seg	:	:	:	:	:

Description

Serine carboxypeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG400024802]

Coordinates

chr4:-:58430789..58434286

Molecular Weight (calculated)

53907.5 Da

IEP (calculated)

7.108

GRAVY (calculated)

-0.207

Length

481 amino acids

Sequence
(BLAST)

001: MGVWWFCGLV ILGLVIGGKG YPEEDLVKAL PGQPKVGFRQ YAGYVEVDVK AGRSLFYYFV EAEVKPDEKP LALWLNGGPG CSSIGGGAFT ELGPFFPTGD
101: GRGLRRNSKS WNKASNLLFV ESPAGVGWSY SNTSSDYTTG DAKTGKTKMQ RCCDQALAAM DMHMFMMEWV KKFPAFKSRE LYLTGESYAG HYIPQLAAAL
201: LDHNEHSKEY KFNIKGVAIG NPLLRLDRDV PATYEYFWSH GMISDEVGLT IMNQCDFDDY TFGSPHNVSQ ACNNAISEAN TIVSEYINNY DVILDVCYPS
301: IVEQELRLKK MATKISVGVD VCMTYERRFY FNLPEVQKAL HANRTNLPYT WSMCSNILKY SDTDGNINIL PLLKRIIENH IPVWIFSGDQ DSVVPLLGSR
401: TLVRELAHDM GFKITVPYGA WFHKGQVGGW QTEYGNLLTF ATVRGAAHMV PYAQPARALH LFSSFIRGRR LPNNTRPSID D

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.