CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64547	Soybean	extracellular, vacuole	85.01	87.53
KRH53391	Soybean	extracellular, vacuole	84.6	87.1
VIT_18s0001g15550.t01	Wine grape	extracellular	78.44	81.8
Solyc04g064760.2.1	Tomato	nucleus	78.23	81.58
PGSC0003DMT400063802	Potato	vacuole	78.03	79.0
Os11t0213600-01	Rice	plasma membrane	71.87	75.27
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	71.87	73.53
TraesCS4B01G106700.1	Wheat	vacuole	70.64	73.04
TraesCS4D01G103600.1	Wheat	vacuole	70.64	72.88
TraesCS4A01G202600.1	Wheat	vacuole	70.64	72.88
Zm00001d004691_P001	Maize	vacuole	69.82	71.88
TraesCS4B01G264700.1	Wheat	vacuole	68.38	70.7
TraesCS4D01G264700.1	Wheat	vacuole	67.97	70.28
TraesCS4A01G043900.1	Wheat	vacuole	63.45	69.59
Zm00001d049055_P001	Maize	vacuole	70.64	69.35
GSMUA_Achr8P29460_001	Banana	vacuole	73.72	67.35
HORVU4Hr1G016730.17	Barley	plastid	72.07	66.98
GSMUA_Achr6P29260_001	Banana	plasma membrane	63.66	65.54
KRH00258	Soybean	vacuole	10.68	55.32
KRH44745	Soybean	cytosol, nucleus, vacuole	10.47	46.36
KRH01514	Soybean	vacuole	43.33	45.77
KRH66743	Soybean	extracellular	43.12	45.75
KRH45206	Soybean	plasma membrane	42.92	45.34
KRG95071	Soybean	vacuole	42.92	45.24
KRH63848	Soybean	nucleus	43.33	44.99
KRH54117	Soybean	nucleus, vacuole	42.71	44.26
KRH66744	Soybean	vacuole	41.89	44.25
KRH66741	Soybean	extracellular, vacuole	41.89	44.16
KRG95073	Soybean	extracellular, vacuole	41.48	43.91
KRH33130	Soybean	nucleus	40.86	42.89
KRH41079	Soybean	vacuole	41.27	42.41
KRH66738	Soybean	nucleus	40.04	40.54
KRH30802	Soybean	vacuole	14.99	40.11
KRG98789	Soybean	cytosol, mitochondrion	10.88	39.55
KRG95070	Soybean	vacuole	29.57	38.5
KRH30255	Soybean	peroxisome	16.02	35.78
KRH02406	Soybean	cytosol	20.94	29.48
KRH63258	Soybean	mitochondrion	7.6	26.81

Protein Annotations

EntrezGene:100801752	MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02008736
EnsemblPlantsGene:GLYMA_14G122200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	UniProt:I1MAF1
InterPro:IPR029058	EnsemblPlants:KRH15957	ProteinID:KRH15957	ProteinID:KRH15957.1	PFAM:PF00450	PRINTS:PR00724
ScanProsite:PS00131	PFscan:PS51257	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	MEROPS:S10.005
SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	TMHMM:TMhelix	UniParc:UPI00023D3DA8	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:-:17801828..17807263

Molecular Weight (calculated)

54541.2 Da

IEP (calculated)

6.832

GRAVY (calculated)

-0.107

Length

487 amino acids

Sequence
(BLAST)

001: MDKGWLSSEG VVVMGRCWLV GVIIVVGCAS FLGTVGVVEG YPAEDLVVKL PGQPKVGFKQ FAGYVDVDAK HGRSLFYYFV EAEQDPHKKP LTLWLNGGPG
101: CSSIGGGAFT ELGPFYPKGD GRGLRRNSMS WNKASNLLFV ESPAGVGWSY SNTTSDYNSG DASTANDMYL FMLKWYEKFP SYITRELFLT GESYAGHYIP
201: QLTNVLLDHN ARSTGSKFNI KGVAIGNPLL RLDRDAPAIY EYFWSHGMIS DEIGLAIMND CDFDDYVYAS PHNVSQLCNN AIYEANLIVG DYINNYDVIL
301: DVCYTSIMEQ ELRLKRMATK ISVSVDVCMT LERRFYFNLP EVQKALHANR TNLPYSWSMC SHVLNYRDTD GNINILPILK RIVQNHIPVW VFSGDQDSVV
401: PLLGSRTLIR ELAHELQFKI TVPYGAWFHK GQVGGWVTEY GNLLTFATVR GAAHMVPYAQ PSRALHLFSS FVRGRRLPNT TRPSIDE

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.