CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	nucleus
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39011	Canola	vacuole	48.84	40.24
KRH30802	Soybean	vacuole	18.5	35.16
KRG98789	Soybean	cytosol, mitochondrion	11.85	30.6
KRH30255	Soybean	peroxisome	17.92	28.44
KRH00258	Soybean	vacuole	6.65	24.47
KRH66744	Soybean	vacuole	29.77	22.34
KRH66743	Soybean	extracellular	29.19	22.0
KRG95071	Soybean	vacuole	29.19	21.86
KRG95073	Soybean	extracellular, vacuole	28.9	21.74
KRH66741	Soybean	extracellular, vacuole	28.9	21.64
KRH66738	Soybean	nucleus	30.06	21.62
KRH53391	Soybean	extracellular, vacuole	29.48	21.56
KRH54117	Soybean	nucleus, vacuole	29.19	21.49
KRH64547	Soybean	extracellular, vacuole	28.9	21.14
KRH63848	Soybean	nucleus	28.61	21.11
KRH45206	Soybean	plasma membrane	28.03	21.04
KRH01514	Soybean	vacuole	28.03	21.04
KRH15957	Soybean	nucleus	29.48	20.94
KRH33130	Soybean	nucleus	27.75	20.69
KRH41079	Soybean	vacuole	27.46	20.04
KRH44745	Soybean	cytosol, nucleus, vacuole	6.36	20.0
KRG95070	Soybean	vacuole	20.81	19.25
KRH63258	Soybean	mitochondrion	3.18	7.97

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	UniProt:A0A0R0F812	InterPro:AB_hydrolase	EMBL:ACUP02010305	EnsemblPlantsGene:GLYMA_17G036900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058	EnsemblPlants:KRH02406
ProteinID:KRH02406	ProteinID:KRH02406.1	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802
PANTHER:PTHR11802:SF25	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	UniParc:UPI0006ED70B7	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:2694106..2696329

Molecular Weight (calculated)

39996.6 Da

IEP (calculated)

5.114

GRAVY (calculated)

-0.527

Length

346 amino acids

Sequence
(BLAST)

001: MPDTGRARVR NDNKLSHIDK KNSDMHHHGA IEVKQLNELM GSTLFIKASA INVETYESDR IIDLPGQPSS PSVSHFSGYI TVNENHGRTL FYWLFEAQSE
101: PSKKPLLLWL NGANLLFVES PVGVGFFYTN TSSDFTILED NFVVAIFVDK LLQSAEDTYN FLVNWLQRFP QFKSREFFIS GESYGGHYIP QLAELIFDRN
201: KDRNKYPSIN LKGFIVGNPE TGDYYDYKGV LEYAWSHAVI SDQQYDKAKQ LCDFKQFDWP NECNKAMNEV FLDYSEIDIF NIYAPACRLN STSSIADHSN
301: SNNPESSTKE RNDYRLRMRI FGGYDPCYSN YAEEYFSRKD VQSFFM

Best Arabidopsis Sequence Match ( AT3G17180.1 )
(BLAST)

001: MNLTLPMKKQ KFLLIISLLI LLSLLHQDYH IEAQNSDKVV NLPEQPLNPK ISHFSGYVNV NQENTRSLFF WFFEALSESP STRPLVLWLN GGPGCSSIGY
101: GAASELGPFR VVENGTSLSF NQYSWVQEAN MLFLESPVGV GFSYTNSSSD LENLNDAFVA EDAYNFMVAW FARYPQYKSR DFFIAGESYA GHYSPQLAEL
201: IYDRNKVQPK DSFINLKGFI VGNPLTDDEY DNKGILEYAW SHAVISDHLY DSAKHNCDFK SSNWSEPCNV AMNTVFTKYK EIDIYNIYAP KCISNSSSGA
301: SYLGFGVNDK SPAVKDWFKR VRWFEGYDPC YSNYAEEYFN RVDVRLSLHA TTRNVARWKV CNDSILQTYH FTVSSMLPTY SKLIKAGLKI WVYSGDADGR
401: VPVIGSRYCV EALGISVKSE WRSWFHNHQV GGRITEYEGG LTFVTVRGAG HLVPLNKPEE ALALFRSFLN GQELPSSP

Arabidopsis Description

SCPL33Serine carboxypeptidase-like 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSM9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.