CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53391	Soybean	extracellular, vacuole	95.77	95.77
KRH15957	Soybean	nucleus	87.53	85.01
VIT_18s0001g15550.t01	Wine grape	extracellular	80.55	81.58
Solyc04g064760.2.1	Tomato	nucleus	78.86	79.87
PGSC0003DMT400063802	Potato	vacuole	78.65	77.34
Os11t0213600-01	Rice	plasma membrane	74.0	75.27
TraesCS4B01G106700.1	Wheat	vacuole	72.94	73.25
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	73.57	73.11
TraesCS4D01G103600.1	Wheat	vacuole	72.94	73.09
TraesCS4A01G202600.1	Wheat	vacuole	72.94	73.09
Zm00001d004691_P001	Maize	vacuole	71.88	71.88
TraesCS4B01G264700.1	Wheat	vacuole	70.4	70.7
TraesCS4D01G264700.1	Wheat	vacuole	70.4	70.7
Zm00001d049055_P001	Maize	vacuole	73.15	69.76
TraesCS4A01G043900.1	Wheat	vacuole	64.27	68.47
GSMUA_Achr8P29460_001	Banana	vacuole	76.74	68.11
HORVU4Hr1G016730.17	Barley	plastid	74.21	66.98
GSMUA_Achr6P29260_001	Banana	plasma membrane	66.81	66.81
KRH00258	Soybean	vacuole	10.57	53.19
KRH45206	Soybean	plasma membrane	45.03	46.2
KRH01514	Soybean	vacuole	45.03	46.2
KRH66743	Soybean	extracellular	44.61	45.97
KRG95071	Soybean	vacuole	44.19	45.24
KRH63848	Soybean	nucleus	44.4	44.78
KRH66744	Soybean	vacuole	43.55	44.69
KRH66741	Soybean	extracellular, vacuole	43.55	44.59
KRH44745	Soybean	cytosol, nucleus, vacuole	10.36	44.55
KRG95073	Soybean	extracellular, vacuole	43.13	44.35
KRH54117	Soybean	nucleus, vacuole	43.55	43.83
KRH33130	Soybean	nucleus	42.92	43.75
KRH41079	Soybean	vacuole	42.49	42.41
KRH30802	Soybean	vacuole	16.28	42.31
KRH66738	Soybean	nucleus	42.07	41.37
KRG95070	Soybean	vacuole	31.5	39.84
KRG98789	Soybean	cytosol, mitochondrion	11.21	39.55
KRH30255	Soybean	peroxisome	15.86	34.4
KRH02406	Soybean	cytosol	21.14	28.9
KRH63258	Soybean	mitochondrion	8.25	28.26

Protein Annotations

EntrezGene:100815723	MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02002767	EnsemblPlantsGene:GLYMA_04G240600
GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0051603	InterPro:IPR029058	UniProt:K7KM24	ProteinID:KRH64546.1	EnsemblPlants:KRH64547	ProteinID:KRH64547
ProteinID:KRH64547.1	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PFscan:PS51257	PANTHER:PTHR11802
PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002957C22	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:50888194..50892609

Molecular Weight (calculated)

52900.0 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.165

Length

473 amino acids

Sequence
(BLAST)

001: MKRCWLVGVL IVVGCACMMG TVGVEGYPDE DLIVSLPGQP KVGFKQYAGY VDIDVKHGRS LFYYFVEAEN GPDKKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPKGDGRGL RRNSMSWNRA SNLLFVESPA GVGWSYSNKT SDYNSGDSST ATDMLLFLRK WYEKFPSYRS RELFLTGESY AGHYIPQLAN VLLDYNAHST
201: GFKFNIKGVA IGNPLLKLDR DAQATYEYFW SHGMISDEIG LAITNDCDFD DYVFASTHNV SKSCNEAINE ANEIVGDYIN NYDVILDVCY PSIVEQELRL
301: KKMATKISIG VDVCMTYERS FYFNLPEVQK ALHANRTNLP YQWSMCSGVL NYSDTDPNID ILPVLKKIVQ NHIPVWVFSG DQDSVVPLLG SRTLIRELAH
401: DLKFKITVPY GAWFHKGQVG GWVTEYGNLL TFATVRGAAH MVPYAQPSRA LHLFSSFVLR KRLPNTTHPS IDD

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.