CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 3
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98789	Soybean	cytosol, mitochondrion	41.82	34.33
KRH00258	Soybean	vacuole	29.09	34.04
KRH30255	Soybean	peroxisome	31.82	16.05
KRH53391	Soybean	extracellular, vacuole	45.45	10.57
KRH15957	Soybean	nucleus	46.36	10.47
KRH30802	Soybean	vacuole	17.27	10.44
KRH64547	Soybean	extracellular, vacuole	44.55	10.36
KRH66743	Soybean	extracellular	42.73	10.24
KRH63848	Soybean	nucleus	43.64	10.23
KRH54117	Soybean	nucleus, vacuole	43.64	10.21
KRH41079	Soybean	vacuole	43.64	10.13
KRG95073	Soybean	extracellular, vacuole	40.91	9.78
KRH66744	Soybean	vacuole	40.91	9.76
KRG95071	Soybean	vacuole	40.91	9.74
KRH45206	Soybean	plasma membrane	40.0	9.54
KRH01514	Soybean	vacuole	40.0	9.54
KRH66741	Soybean	extracellular, vacuole	40.0	9.52
KRG95070	Soybean	vacuole	31.82	9.36
KRH33130	Soybean	nucleus	38.18	9.05
KRH66738	Soybean	nucleus	37.27	8.52
KRH02406	Soybean	cytosol	20.0	6.36
KRH63258	Soybean	mitochondrion	3.64	2.9

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02004955	EnsemblPlantsGene:GLYMA_08G228700	GO:GO:0003674
GO:GO:0003824	GO:GO:0004185	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	UniProt:K7L888	EnsemblPlants:KRH44745
ProteinID:KRH44745	ProteinID:KRH44745.1	PFAM:PF00450	PRINTS:PR00724	PANTHER:PTHR11802	PANTHER:PTHR11802:SF31
InterPro:Peptidase_S10	SUPFAM:SSF53474	UniParc:UPI00029665AC	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:18659800..18660460

Molecular Weight (calculated)

11955.9 Da

IEP (calculated)

4.282

GRAVY (calculated)

-0.247

Length

110 amino acids

Sequence
(BLAST)

001: MFSGPGCSSI GYGEVEELGP FFPQDSSQPK LKLNPYSWNN ATNLLFLESP VRVGFSYTNT SSDISELGDT ITGNIHTPLS SSGLEDFHNL DHTNSTFSVK
101: AMQLLPTPLL

Best Arabidopsis Sequence Match ( AT5G23210.5 )
(BLAST)

001: MVKNVNIGPG CSSIGFGAAE ELGPFFPQNS SQPKLKLNPY SWNKAANLLF LESPVGVGFS YTNTSRDIKQ LGDTVTARDS YNFLVNWFKR FPQYKSHDFY
101: IAGESYAGHY VPQLSELIYK ENKIASKKDF INLKGLMIGN ALLDDETDQK GMIEYAWDHA VISDALYEKV NKNCDFKQKL VTKECNDALD EYFDVYKILD
201: MYSLYAPKCV PTSTNSSTSH SVAGNRPLPA FRSILRPRLI SHNEGWRRMA AGYDPCASEY TEKYMNRKDV QEALHANVTN ISYPWTHCSD TVSFWSDAPA
301: SMLPTLRTLV SAGLRVWVFS GDTDGRIPVT ATRYSLKKLG LKIVQDWTPW YTKLQVGGWT VEYDGLMFVT VRGAGHQVPT FKPREALQLI HHFLGNKKLP
401: TFPF

Arabidopsis Description

SCPL34Serine carboxypeptidase-like 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPR4]
SUBAcon: [peroxisome,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.