CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
vacuole 2
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44745	Soybean	cytosol, nucleus, vacuole	34.33	41.82
KRH00258	Soybean	vacuole	21.64	30.85
GSMUA_AchrUn_...	Banana	extracellular, vacuole	36.57	23.67
KRH30255	Soybean	peroxisome	36.57	22.48
KRH30802	Soybean	vacuole	27.61	20.33
KRG95070	Soybean	vacuole	34.33	12.3
KRH66743	Soybean	extracellular	41.04	11.98
KRH66744	Soybean	vacuole	41.04	11.93
KRH66741	Soybean	extracellular, vacuole	41.04	11.9
KRH02406	Soybean	cytosol	30.6	11.85
KRG95073	Soybean	extracellular, vacuole	40.3	11.74
KRG95071	Soybean	vacuole	40.3	11.69
KRH53391	Soybean	extracellular, vacuole	40.3	11.42
KRH64547	Soybean	extracellular, vacuole	39.55	11.21
KRH15957	Soybean	nucleus	39.55	10.88
KRH63848	Soybean	nucleus	38.06	10.87
KRH54117	Soybean	nucleus, vacuole	38.06	10.85
KRH45206	Soybean	plasma membrane	37.31	10.85
KRH01514	Soybean	vacuole	37.31	10.85
KRH33130	Soybean	nucleus	36.57	10.56
KRH66738	Soybean	nucleus	36.57	10.19
KRH41079	Soybean	vacuole	35.82	10.13
HORVU7Hr1G094200.1	Barley	cytosol	8.96	4.74
CDY21526	Canola	peroxisome	1.49	0.68
KRH63258	Soybean	mitochondrion	0.0	0.0

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02010921	EnsemblPlantsGene:GLYMA_18G098200	GO:GO:0003674
GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058
UniProt:K7MQY5	EnsemblPlants:KRG98789	ProteinID:KRG98789	ProteinID:KRG98789.1	PFAM:PF00450	PRINTS:PR00724
ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF31	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS
UniParc:UPI00029494F4	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:10197299..10198615

Molecular Weight (calculated)

15192.9 Da

IEP (calculated)

9.046

GRAVY (calculated)

-0.516

Length

134 amino acids

Sequence
(BLAST)

001: MRRHLLAHLA ERDTRVARPE LVGNMNLRVR SESPSCSSIG YGEAEELGPL FPQDNSQPKL KLNPYSWNNA ANLLSLESPV GVRFSYTNTS SDISELGDTI
101: TAKDSHTFII KWFRRFPQFR SHKFYISGES YAGI

Best Arabidopsis Sequence Match ( AT5G23210.1 )
(BLAST)

001: MGSHSVEFSV LVLFLVSFLL GSTSAEKLCS DNDGDNGCFR SRVLAAQRAD RVKELPGQPP VKFRQYAGYV TVNETHGRAL FYWFFEATQN PSKKPVLLWL
101: NGGPGCSSIG FGAAEELGPF FPQNSSQPKL KLNPYSWNKA ANLLFLESPV GVGFSYTNTS RDIKQLGDTV TARDSYNFLV NWFKRFPQYK SHDFYIAGES
201: YAGHYVPQLS ELIYKENKIA SKKDFINLKG LMIGNALLDD ETDQKGMIEY AWDHAVISDA LYEKVNKNCD FKQKLVTKEC NDALDEYFDV YKILDMYSLY
301: APKCVPTSTN SSTSHSVAGN RPLPAFRSIL RPRLISHNEG WRRMAAGYDP CASEYTEKYM NRKDVQEALH ANVTNISYPW THCSDTVSFW SDAPASMLPT
401: LRTLVSAGLR VWVFSGDTDG RIPVTATRYS LKKLGLKIVQ DWTPWYTKLQ VGGWTVEYDG LMFVTVRGAG HQVPTFKPRE ALQLIHHFLG NKKLPTFPF

Arabidopsis Description

SCPL34Serine carboxypeptidase-like 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.