CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95073	Soybean	extracellular, vacuole	74.57	75.22
KRH66743	Soybean	extracellular	74.14	74.95
KRG95071	Soybean	vacuole	74.57	74.89
KRH66744	Soybean	vacuole	73.71	74.19
KRH66741	Soybean	extracellular, vacuole	73.49	73.81
KRH30802	Soybean	vacuole	27.16	69.23
KRH00258	Soybean	vacuole	13.79	68.09
KRH01514	Soybean	vacuole	64.44	64.86
KRH45206	Soybean	plasma membrane	64.22	64.64
KRH63848	Soybean	nucleus	62.93	62.26
KRH54117	Soybean	nucleus, vacuole	62.93	62.13
KRH41079	Soybean	vacuole	62.5	61.18
KRH66738	Soybean	nucleus	57.33	55.3
KRG95070	Soybean	vacuole	42.67	52.94
KRH63258	Soybean	mitochondrion	14.87	50.0
KRH53391	Soybean	extracellular, vacuole	43.97	43.13
KRH64547	Soybean	extracellular, vacuole	43.75	42.92
KRH15957	Soybean	nucleus	42.89	40.86
KRH44745	Soybean	cytosol, nucleus, vacuole	9.05	38.18
KRG98789	Soybean	cytosol, mitochondrion	10.56	36.57
GSMUA_Achr11P...	Banana	extracellular	7.76	36.36
KRH30255	Soybean	peroxisome	16.59	35.32
KRH02406	Soybean	cytosol	20.69	27.75

Protein Annotations

EntrezGene:100805028	MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02006364
EnsemblPlantsGene:GLYMA_10G102100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	UniProt:I1LA88	InterPro:IPR029058	EnsemblPlants:KRH33130	ProteinID:KRH33130
ProteinID:KRH33130.1	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF94
InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	UniParc:UPI00023CE440

Description

hypothetical protein

Coordinates

chr10:-:20236973..20240885

Molecular Weight (calculated)

51607.5 Da

IEP (calculated)

5.288

GRAVY (calculated)

-0.057

Length

464 amino acids

Sequence
(BLAST)

001: MIFQSCFMMT ATLLLFVIAQ CVVGVNSLSQ ADKISTLPGQ PPVKFQQYAG YITVDDKQKR ALFYYFVEAE VEPASKPLVL WLNGGPGCSS VGAGAFVEHG
101: PFKPSENGLL KNEHSWNKEA NMLYLESPAG VGFSYSANKS FYDFVNDEMT ARDNLVFLQR WFTKFPELKN NDFFITGESY AGHYVPQLAQ LIVQTKTKFN
201: LKGIAIGNPL VEFNTDFNSR AEFFWSHGLI SDSTYEIFTK VCNYSQIRRQ HQGGTLTPIC SGVNRLVSTE VSRYIDTYDV TLDVCLSSAD QQAYVLNQLT
301: QLQEGAKIDV CVEDETIAYL NRKDVQEALH AKLVGITSWS TCSDVLKYDM QNLEIPTISI LGALAKSGIR VLVYSGDQDS VIPLTGTRSL VNGLAKDFGL
401: NTTVSYRAWF EGRQVAGWTQ VYGDILSFAT IRGAAHEAPF SQPERSLVLL KAFLEGKPLP EPFL

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.