CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004691_P001	Maize	vacuole	89.92	90.49
Os11t0213600-01	Rice	plasma membrane	87.39	89.46
Zm00001d049055_P001	Maize	vacuole	92.23	88.51
TraesCS4B01G106700.1	Wheat	vacuole	85.71	86.62
TraesCS4D01G103600.1	Wheat	vacuole	85.71	86.44
TraesCS4A01G202600.1	Wheat	vacuole	85.5	86.23
TraesCS4D01G264700.1	Wheat	vacuole	81.72	82.59
TraesCS4B01G264700.1	Wheat	vacuole	81.51	82.38
TraesCS4A01G043900.1	Wheat	vacuole	75.42	80.86
HORVU4Hr1G016730.17	Barley	plastid	85.71	77.86
KRH53391	Soybean	extracellular, vacuole	73.53	74.0
KRH64547	Soybean	extracellular, vacuole	73.11	73.57
VIT_18s0001g15550.t01	Wine grape	extracellular	70.8	72.16
KRH15957	Soybean	nucleus	73.53	71.87
PGSC0003DMT400063802	Potato	vacuole	72.06	71.31
AT5G42240.1	Thale cress	vacuole	70.59	71.04
CDX80725	Canola	extracellular, vacuole	69.12	69.12
Bra034921.1-P	Field mustard	extracellular, vacuole	69.12	68.97
CDY48945	Canola	extracellular, vacuole	69.12	68.97
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	68.28	68.57
GSMUA_Achr8P29460_001	Banana	vacuole	76.47	68.29
PGSC0003DMT400076556	Potato	extracellular, vacuole	68.49	68.2
Bra013152.1-P	Field mustard	vacuole	66.39	67.81
CDY70042	Canola	vacuole	63.24	67.04
CDX93108	Canola	vacuole	63.24	67.04
AT1G43780.1	Thale cress	extracellular, vacuole	67.02	66.6
AT2G12480.3	Thale cress	vacuole	64.71	65.81
AT5G42230.2	Thale cress	extracellular, vacuole	64.71	65.67
GSMUA_Achr6P29260_001	Banana	plasma membrane	65.13	65.54
CDX81435	Canola	cytosol	56.09	64.65
Bra037202.1-P	Field mustard	extracellular	63.03	63.97
Bra040939.1-P	Field mustard	extracellular, vacuole	62.18	63.11
CDY66139	Canola	extracellular	64.08	62.76
CDY23340	Canola	vacuole	61.55	62.47
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	56.3	60.77
Bra022715.1-P	Field mustard	extracellular	51.05	60.6
CDY66771	Canola	cytosol	14.5	60.0
CDY37202	Canola	extracellular	56.72	59.21
Solyc10g054090.1.1	Tomato	extracellular	11.55	58.51
EES10676	Sorghum	extracellular	45.59	45.78
OQU83511	Sorghum	extracellular, plastid, vacuole	43.49	43.04
OQU77701	Sorghum	vacuole	25.21	35.5

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	EntrezGene:8071712	InterPro:AB_hydrolase	UniProt:C5Y1W9	EnsemblPlants:EES08376
ProteinID:EES08376	ProteinID:EES08376.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	PFAM:PF00450	PRINTS:PR00724
ScanProsite:PS00131	ScanProsite:PS00560	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	EnsemblPlantsGene:SORBI_3005G102800
SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0001A864E7
RefSeq:XP_002449388.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:18053853..18058572

Molecular Weight (calculated)

53093.9 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.128

Length

476 amino acids

Sequence
(BLAST)

001: MAAVSWRAVV LAVAAVGWLL VGGGSGGAWA FPAEDLVTRL PGQPPVTFRQ FAGYVDVDVK AGRSLFYYFA EAQQDAAAKP LTLWLNGGPG CSSIGGGAFT
101: ELGPFYPRGD GRGLRLNKKS WNKASNLLFV ESPAGVGWSY SNTSSDYNTG DVQTANDMYQ FLLGWYVKFP EYRSRALFLT GESYAGHYIP QLTDVLLTHN
201: EKSKGFKFNI KGVAIGNPLL KLDRDVPATY EYFWSHGMIS DEIFLAISHS CDFEDYTFND PHNESKSCND AIAEANSIVG DYVNNYDVIL DVCYPSIVMQ
301: ELRLRQYATK ISIGVDVCMS YERYFYFNLP EVQQALHANR THLKYNWSMC SDILNYSNTD GNINILPTLQ RIVEHKIPLW VFSGDQDSVV PLLGSRTLVR
401: ELAHNMGLQV TVPYSTWFRR GQVGGWVTQY GNFLTFATVR GASHMVPFAQ PDRALRLFQS IVLGQRLPNT TSPPIE

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.