Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | vacuole | 10.36 | 33.33 |
| EES10676 | Sorghum | extracellular | 36.69 | 26.16 |
| EES08376 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 35.5 | 25.21 |
| OQU83511 | Sorghum | extracellular, plastid, vacuole | 35.5 | 24.95 |
| CDY65614 | Canola | extracellular, vacuole | 13.02 | 15.12 |
Protein Annotations
| MapMan:19.4.2.2 | Gene3D:3.40.50.1820 | UniProt:A0A1Z5R2N2 | InterPro:AB_hydrolase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004180 | GO:GO:0004185 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR029058 | EnsemblPlants:OQU77701 | ProteinID:OQU77701 | ProteinID:OQU77701.1 |
| PFAM:PF00450 | PRINTS:PR00724 | ScanProsite:PS00131 | PANTHER:PTHR11802 | PANTHER:PTHR11802:SF122 | InterPro:Peptidase_S10 |
| EnsemblPlantsGene:SORBI_3009G090100 | SUPFAM:SSF53474 | InterPro:Ser_caboxypep_ser_AS | SignalP:SignalP-noTM | UniParc:UPI000B8B9D2A | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:16972331..16973870
Molecular Weight (calculated)
37826.5 Da
IEP (calculated)
8.924
GRAVY (calculated)
-0.307
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRFPVAVV AAAVLLTWVA QLRATTTVVV ATANKQAGHE ADRVVWVPGQ PADVDFPMYS GYVTVDHHAG RALFYWLQEV PPKAQPAPLV LWLNGGPGCS
101: SVAYGASEER GAFRIRPDGA ALFLNRYRWN RGTVRLLQLR LRLASVAANI LFLDSPAGVG FSYTNTTSDL YNSGDRRTAH DSYKFLVKWF ERFPQYKYRD
201: FYIAGESYAG HYLPQLSQIV YRKNKGVEKP IINFKGFMVG NAVTDDYHDQ VGTFESWWNH GLISDATYRF LEATCVHDEI EHASPPCNAA YDAATAEQGD
301: IDPYSMYTPT CNQTSSSSSS STPRRIRRLK GRYVSRSY
101: SVAYGASEER GAFRIRPDGA ALFLNRYRWN RGTVRLLQLR LRLASVAANI LFLDSPAGVG FSYTNTTSDL YNSGDRRTAH DSYKFLVKWF ERFPQYKYRD
201: FYIAGESYAG HYLPQLSQIV YRKNKGVEKP IINFKGFMVG NAVTDDYHDQ VGTFESWWNH GLISDATYRF LEATCVHDEI EHASPPCNAA YDAATAEQGD
301: IDPYSMYTPT CNQTSSSSSS STPRRIRRLK GRYVSRSY
001: MMITKKLYQC MCLLCMVIAL LDVVSSDDAK EQKMKDKIIS LPGQPPNLNF SQFSGYVTVD PAAGRALFYW LTEAPRPSGT KPLVLWLNGG PGCSSIAYGA
101: SEEVGPFRVN PDGKTLRLNL YAWNKVANVL FLDSPAGVGF SYTNTSSDEL TVGDKRTGED AYRFLVRWLE RFPEYKERAF YIAGESYAGH YIPELAQLIV
201: NRNKGAKNPT INLKGILMGN PLVDDYNDNK GMRDYWWNHG LISDESYNDL TKWCLNDSIL FPKLNCNAAL NQALSEFGDI DPYNINSPAC TTHASSNEWM
301: QAWRYRGNDE CVVGYTRKYM NDPNVHKSFH ARLNGSTPWT PCSRVIRKNW KDSPKSMLPI IKNLLQAHLR IWIFSGDSDA VLPLSGTRHS INAMKLKSSK
401: RWYPWYHSHG LVGGWSQVYE DGLLTYTTVR AAGHEVPLSQ PRLALFLFTH FLANHSLPSS PS
101: SEEVGPFRVN PDGKTLRLNL YAWNKVANVL FLDSPAGVGF SYTNTSSDEL TVGDKRTGED AYRFLVRWLE RFPEYKERAF YIAGESYAGH YIPELAQLIV
201: NRNKGAKNPT INLKGILMGN PLVDDYNDNK GMRDYWWNHG LISDESYNDL TKWCLNDSIL FPKLNCNAAL NQALSEFGDI DPYNINSPAC TTHASSNEWM
301: QAWRYRGNDE CVVGYTRKYM NDPNVHKSFH ARLNGSTPWT PCSRVIRKNW KDSPKSMLPI IKNLLQAHLR IWIFSGDSDA VLPLSGTRHS INAMKLKSSK
401: RWYPWYHSHG LVGGWSQVYE DGLLTYTTVR AAGHEVPLSQ PRLALFLFTH FLANHSLPSS PS
Arabidopsis Description
SCPL28Serine carboxypeptidase-like 28 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8K6]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.