Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 9
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P29250_001 | Banana | extracellular | 31.43 | 27.27 |
| GSMUA_Achr11P... | Banana | extracellular | 21.9 | 23.23 |
| GSMUA_Achr1P01930_001 | Banana | vacuole | 36.19 | 18.01 |
| GSMUA_AchrUn_... | Banana | extracellular, vacuole | 25.71 | 13.04 |
| OQU77701 | Sorghum | vacuole | 33.33 | 10.36 |
| GSMUA_Achr9P01080_001 | Banana | extracellular, vacuole | 39.05 | 8.78 |
| GSMUA_Achr6P11030_001 | Banana | vacuole | 37.14 | 8.35 |
| GSMUA_Achr10P... | Banana | vacuole | 36.19 | 8.26 |
| GSMUA_Achr8P29460_001 | Banana | vacuole | 31.43 | 6.19 |
| GSMUA_Achr6P29260_001 | Banana | plasma membrane | 7.62 | 1.69 |
| CDY65614 | Canola | extracellular, vacuole | 0.95 | 0.34 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.4.2.2 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004185 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr10G05540_001 |
| EnsemblPlants:GSMUA_Achr10P05540_001 | EnsemblPlants:GSMUA_Achr10T05540_001 | InterPro:IPR029058 | UniProt:M0RFN1 | PFAM:PF00450 | PANTHER:PTHR11802 |
| PANTHER:PTHR11802:SF87 | InterPro:Peptidase_S10 | SUPFAM:SSF53474 | SignalP:SignalP-noTM | UniParc:UPI0002955DC8 | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G05540_001]
Coordinates
chr10:+:15583977..15584294
Molecular Weight (calculated)
11321.8 Da
IEP (calculated)
7.514
GRAVY (calculated)
0.293
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAAMGGHLR DASLSLLFIS LLPLLTAAVG TMADQQAHDR ITALPGQPPV TFAQFSGYVT VNKEQGRALF YWLTEAATDA AKKPLVLWLN GGQSLLPCFL
101: ASYRD
101: ASYRD
001: MARTHLLFLL FVLLSLATSS TSTKEQEEDR IKALPGQPKV GFSQFSGYVT VNESHGRSLF YWLTESSSHS PHTKPLLLWL NGGPGCSSIA YGASEEIGPF
101: RISKTGCNLY LNNFSWNTGH YVPQLAQKIH EYNNAYKNPV INLKGFMVGN PEMDKNNDRL GTITYWWSHA MISDASYNRI LKNCDFTADR FSKECDSAIY
201: VAAADFGDID QYSIYTPKCV PPQDQTNQTK FEQMMQMHTT KRFLEDQYDP CTENYAEIYY NRPEVQRAMH ANHTAIPYKW TACSDSVFNN WNWRDSDNSM
301: LPIYKELIAA GLRIWVYSGD TDSVIPVTAT RYSLGKLNLR VKTRWYPWYS GNQVGGRTEV YEGLTFVTVR GAGHEVPFFQ PQSALILLRS FLAGNELSRS
401: Y
101: RISKTGCNLY LNNFSWNTGH YVPQLAQKIH EYNNAYKNPV INLKGFMVGN PEMDKNNDRL GTITYWWSHA MISDASYNRI LKNCDFTADR FSKECDSAIY
201: VAAADFGDID QYSIYTPKCV PPQDQTNQTK FEQMMQMHTT KRFLEDQYDP CTENYAEIYY NRPEVQRAMH ANHTAIPYKW TACSDSVFNN WNWRDSDNSM
301: LPIYKELIAA GLRIWVYSGD TDSVIPVTAT RYSLGKLNLR VKTRWYPWYS GNQVGGRTEV YEGLTFVTVR GAGHEVPFFQ PQSALILLRS FLAGNELSRS
401: Y
Arabidopsis Description
SCPL22Serine carboxypeptidase-like 22 [Source:UniProtKB/Swiss-Prot;Acc:Q1PF08]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.