Factsheet for GSMUA_Achr1P01930_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
vacuole 5
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	vacuole	18.01	36.19
CDY21525	Canola	vacuole	33.18	35.35
GSMUA_Achr6P29250_001	Banana	extracellular	16.59	28.93
GSMUA_AchrUn_...	Banana	extracellular, vacuole	23.7	24.15
GSMUA_Achr11P...	Banana	extracellular	10.9	23.23
GSMUA_Achr10P...	Banana	vacuole	32.7	15.0
GSMUA_Achr6P11030_001	Banana	vacuole	33.18	14.99
GSMUA_Achr9P01080_001	Banana	extracellular, vacuole	30.81	13.92
GSMUA_Achr8P29460_001	Banana	vacuole	33.18	13.13
GSMUA_Achr6P29260_001	Banana	plasma membrane	19.43	8.67
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	0.47	0.62

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180
GO:GO:0004185	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G01930_001	EnsemblPlants:GSMUA_Achr1P01930_001
EnsemblPlants:GSMUA_Achr1T01930_001	InterPro:IPR029058	UniProt:M0RWA1	PFAM:PF00450	ScanProsite:PS00131	PANTHER:PTHR11802
PANTHER:PTHR11802:SF31	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	TMHMM:TMhelix	UniParc:UPI000294E2D6
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G01930_001]

Coordinates

chr1:-:1585393..1588860

Molecular Weight (calculated)

23918.1 Da

IEP (calculated)

8.124

GRAVY (calculated)

0.182

Length

211 amino acids

Sequence
(BLAST)

001: MVMKMDTARN SSKVWISGNS EKNPLIPGEA LWLSDMVVSL QEFIMCINQS NVRYIMVFLS LFLFLSIFVP IASPSVLSYD PTRSPVNFSH YAGYVPVNES
101: HGRGLFYWFF EATHAPKKKP LLLWLNGGPG CSSIGYGAAE ELGPFLIHKS TSCCCLLTSC PMQLFVAEDS YIFLLNWFKR FPQFKSHDFY IAGESYAGNR
201: HMVVIRESLR L

Best Arabidopsis Sequence Match ( AT5G23210.1 )
(BLAST)

001: MGSHSVEFSV LVLFLVSFLL GSTSAEKLCS DNDGDNGCFR SRVLAAQRAD RVKELPGQPP VKFRQYAGYV TVNETHGRAL FYWFFEATQN PSKKPVLLWL
101: NGGPGCSSIG FGAAEELGPF FPQNSSQPKL KLNPYSWNKA ANLLFLESPV GVGFSYTNTS RDIKQLGDTV TARDSYNFLV NWFKRFPQYK SHDFYIAGES
201: YAGHYVPQLS ELIYKENKIA SKKDFINLKG LMIGNALLDD ETDQKGMIEY AWDHAVISDA LYEKVNKNCD FKQKLVTKEC NDALDEYFDV YKILDMYSLY
301: APKCVPTSTN SSTSHSVAGN RPLPAFRSIL RPRLISHNEG WRRMAAGYDP CASEYTEKYM NRKDVQEALH ANVTNISYPW THCSDTVSFW SDAPASMLPT
401: LRTLVSAGLR VWVFSGDTDG RIPVTATRYS LKKLGLKIVQ DWTPWYTKLQ VGGWTVEYDG LMFVTVRGAG HQVPTFKPRE ALQLIHHFLG NKKLPTFPF

Arabidopsis Description

SCPL34Serine carboxypeptidase-like 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.