Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | vacuole | 27.27 | 31.43 |
| GSMUA_Achr11P... | Banana | extracellular | 23.14 | 28.28 |
| PGSC0003DMT400063806 | Potato | extracellular, vacuole | 42.98 | 25.37 |
| GSMUA_AchrUn_... | Banana | extracellular, vacuole | 29.75 | 17.39 |
| GSMUA_Achr1P01930_001 | Banana | vacuole | 28.93 | 16.59 |
| GSMUA_Achr8P29460_001 | Banana | vacuole | 60.33 | 13.7 |
| GSMUA_Achr9P01080_001 | Banana | extracellular, vacuole | 42.98 | 11.13 |
| GSMUA_Achr10P... | Banana | vacuole | 41.32 | 10.87 |
| GSMUA_Achr6P11030_001 | Banana | vacuole | 40.5 | 10.49 |
| GSMUA_Achr6P29260_001 | Banana | plasma membrane | 17.36 | 4.44 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 5.79 | 4.35 |
Protein Annotations
| MapMan:19.4.2.2 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004185 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr6G29250_001 |
| EnsemblPlants:GSMUA_Achr6P29250_001 | EnsemblPlants:GSMUA_Achr6T29250_001 | InterPro:IPR029058 | UniProt:M0TB70 | PFAM:PF00450 | PANTHER:PTHR11802 |
| PANTHER:PTHR11802:SF20 | InterPro:Peptidase_S10 | SUPFAM:SSF53474 | SignalP:SignalP-noTM | UniParc:UPI0002960E0E | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G29250_001]
Coordinates
chr6:+:29528897..29530773
Molecular Weight (calculated)
13881.0 Da
IEP (calculated)
8.467
GRAVY (calculated)
0.138
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MERWWCLMVV VVVVVAVVGR RGEGYPEEDL VVRLPGQPKV GFRQYAGYVD VDEKAGRTLF YYFAEADGDA HAKPLTLWLN GVFLRLSNTV KKMHNSMKHL
101: IYCLIFSQDT FTSICLLRSF T
101: IYCLIFSQDT FTSICLLRSF T
001: MVGGKWRFLE VAVVVMVLQW SCDYNGNLAE GFPVQDLVTK LPGQPEVAFR QFAGYVDIDV KAGRSLFYYF VEAEKQPHSK PLTLWLNGGP GCSSIGGGAF
101: TELGPFYPTG DARGLRRNPK SWNKASNLLF VDSPAGVGWS YSNTTSDYTT GDESTAKDML VFMLRWLEKF PQFKTRNLFL AGESYAGHYV PQLADVILEY
201: NAQRSNRFKF NLKGIAIGNP LLKLDRDVPA IYEFFWSHGM ISDELGLTIM NQCDFEDYTF TDSHNISKLC EAAVNQAGTI ITQYVNYYDI LLDVCYPSLF
301: EQELRLKKMG TRMSFGVDVC MSFEEQLYLN LPEVQKALHA NRTKLPYEWS MCSSLLNYKY TDGNANMLPI LKRIVKSKVP VWVFSGDEDS VIPLLGSRTL
401: VKELADDLNF NTTVPYGAWF DKGQVGGWVV EYGNLLTFAT VRGAAHMVPY SQPSRALHLF TSFVLGRKLP HKSPPALHD
101: TELGPFYPTG DARGLRRNPK SWNKASNLLF VDSPAGVGWS YSNTTSDYTT GDESTAKDML VFMLRWLEKF PQFKTRNLFL AGESYAGHYV PQLADVILEY
201: NAQRSNRFKF NLKGIAIGNP LLKLDRDVPA IYEFFWSHGM ISDELGLTIM NQCDFEDYTF TDSHNISKLC EAAVNQAGTI ITQYVNYYDI LLDVCYPSLF
301: EQELRLKKMG TRMSFGVDVC MSFEEQLYLN LPEVQKALHA NRTKLPYEWS MCSSLLNYKY TDGNANMLPI LKRIVKSKVP VWVFSGDEDS VIPLLGSRTL
401: VKELADDLNF NTTVPYGAWF DKGQVGGWVV EYGNLLTFAT VRGAAHMVPY SQPSRALHLF TSFVLGRKLP HKSPPALHD
Arabidopsis Description
SCPL44Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178WN63]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.