Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P29260_001 | Banana | plasma membrane | 32.92 | 11.21 |
| GSMUA_Achr6P11030_001 | Banana | vacuole | 32.3 | 11.13 |
| GSMUA_Achr10P... | Banana | vacuole | 31.68 | 11.09 |
| GSMUA_Achr8P29460_001 | Banana | vacuole | 32.92 | 9.94 |
| GSMUA_Achr9P01080_001 | Banana | extracellular, vacuole | 28.57 | 9.85 |
| GSMUA_Achr6P29250_001 | Banana | extracellular | 4.35 | 5.79 |
| GSMUA_Achr11P... | Banana | extracellular | 2.48 | 4.04 |
| GSMUA_Achr1P01930_001 | Banana | vacuole | 0.62 | 0.47 |
| GSMUA_Achr10P... | Banana | vacuole | 0.0 | 0.0 |
| GSMUA_AchrUn_... | Banana | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP15120_001 | EnsemblPlants:GSMUA_AchrUn_randomT15120_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG15120_001 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004185 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:Peptidase_S10 | PANTHER:PTHR11802 | PANTHER:PTHR11802:SF31 | PFAM:PF00450 |
| SEG:seg | SUPFAM:SSF53474 | UniParc:UPI000296A332 | UniProt:M0U9C1 | MapMan:19.4.2.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15120_001]
Coordinates
chrchrUn_random:-:71293193..71293939
Molecular Weight (calculated)
18219.6 Da
IEP (calculated)
9.025
GRAVY (calculated)
-0.250
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAIYDTCVP DYTEAFFNRA DVQKALHANV TNLSYNWTYC SNVLTSWSDA PFSMLPTIKK LVDGGIRVWV FRVPVTSTRY ALNKLRLDTV EEWTPWYSDK
101: QVGGWRVIYD GLTFVTVPPG MMFPRSSRRK HSNSSGTSCP TSSCLWSHVS SCCRTLSPSS K
101: QVGGWRVIYD GLTFVTVPPG MMFPRSSRRK HSNSSGTSCP TSSCLWSHVS SCCRTLSPSS K
001: MGSHSVEFSV LVLFLVSFLL GSTSAEKLCS DNDGDNGCFR SRVLAAQRAD RVKELPGQPP VKFRQYAGYV TVNETHGRAL FYWFFEATQN PSKKPVLLWL
101: NGGPGCSSIG FGAAEELGPF FPQNSSQPKL KLNPYSWNKA ANLLFLESPV GVGFSYTNTS RDIKQLGDTV TARDSYNFLV NWFKRFPQYK SHDFYIAGES
201: YAGHYVPQLS ELIYKENKIA SKKDFINLKG LMIGNALLDD ETDQKGMIEY AWDHAVISDA LYEKVNKNCD FKQKLVTKEC NDALDEYFDV YKILDMYSLY
301: APKCVPTSTN SSTSHSVAGN RPLPAFRSIL RPRLISHNEG WRRMAAGYDP CASEYTEKYM NRKDVQEALH ANVTNISYPW THCSDTVSFW SDAPASMLPT
401: LRTLVSAGLR VWVFSGDTDG RIPVTATRYS LKKLGLKIVQ DWTPWYTKLQ VGGWTVEYDG LMFVTVRGAG HQVPTFKPRE ALQLIHHFLG NKKLPTFPF
101: NGGPGCSSIG FGAAEELGPF FPQNSSQPKL KLNPYSWNKA ANLLFLESPV GVGFSYTNTS RDIKQLGDTV TARDSYNFLV NWFKRFPQYK SHDFYIAGES
201: YAGHYVPQLS ELIYKENKIA SKKDFINLKG LMIGNALLDD ETDQKGMIEY AWDHAVISDA LYEKVNKNCD FKQKLVTKEC NDALDEYFDV YKILDMYSLY
301: APKCVPTSTN SSTSHSVAGN RPLPAFRSIL RPRLISHNEG WRRMAAGYDP CASEYTEKYM NRKDVQEALH ANVTNISYPW THCSDTVSFW SDAPASMLPT
401: LRTLVSAGLR VWVFSGDTDG RIPVTATRYS LKKLGLKIVQ DWTPWYTKLQ VGGWTVEYDG LMFVTVRGAG HQVPTFKPRE ALQLIHHFLG NKKLPTFPF
Arabidopsis Description
SCPL34Serine carboxypeptidase-like 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPR4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.