Factsheet for Solyc10g054090.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g064760.2.1	Tomato	nucleus	62.77	12.63
Os11t0213600-01	Rice	plasma membrane	60.64	12.26
TraesCS4B01G106700.1	Wheat	vacuole	60.64	12.1
TraesCS4D01G103600.1	Wheat	vacuole	60.64	12.08
TraesCS4A01G202600.1	Wheat	vacuole	60.64	12.08
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	58.51	11.55
TraesCS4A01G043900.1	Wheat	vacuole	53.19	11.26
TraesCS4B01G264700.1	Wheat	vacuole	56.38	11.25
Zm00001d004691_P001	Maize	vacuole	56.38	11.21
Solyc01g104850.2.1	Tomato	extracellular, vacuole	56.38	11.09
TraesCS4D01G264700.1	Wheat	vacuole	55.32	11.04
Zm00001d049055_P001	Maize	vacuole	57.45	10.89
HORVU4Hr1G016730.17	Barley	plastid	60.64	10.88
GSMUA_Achr6P29260_001	Banana	plasma membrane	54.26	10.78
Solyc03g118370.2.1	Tomato	extracellular	41.49	8.57
Solyc01g010710.2.1	Tomato	extracellular	42.55	8.16
Solyc01g010720.2.1	Tomato	cytosol	34.04	7.62
Solyc01g010730.1.1	Tomato	extracellular, vacuole	5.32	5.43

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	UniProt:K4D107	PFAM:PF00450	PFscan:PS51257
PANTHER:PTHR11802	PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	SUPFAM:SSF53474	EnsemblPlantsGene:Solyc10g054090.1	EnsemblPlants:Solyc10g054090.1.1
TMHMM:TMhelix	UniParc:UPI000276A9E0	:	:	:	:

Description

No Description!

Coordinates

chr10:+:54569996..54570568

Molecular Weight (calculated)

10932.1 Da

IEP (calculated)

7.625

GRAVY (calculated)

-0.179

Length

94 amino acids

Sequence
(BLAST)

1: MKNQKHVAFG TILLLFSCSS SFNWSLCLVV YKEWHYIPQL VGALLDHNEH SKEYKFNNKG VAIGNPLLRL DRDVPANYEY FWSHGMISDE SVRL

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.