Factsheet for TraesCS4B01G106700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G202600.1	Wheat	vacuole	98.73	98.52
TraesCS4D01G103600.1	Wheat	vacuole	98.3	98.09
Os11t0213600-01	Rice	plasma membrane	88.11	89.25
TraesCS4B01G264700.1	Wheat	vacuole	89.17	89.17
HORVU4Hr1G016730.17	Barley	plastid	96.39	86.64
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	86.62	85.71
Zm00001d004691_P001	Maize	vacuole	84.5	84.14
Zm00001d049055_P001	Maize	vacuole	85.35	81.05
KRH64547	Soybean	extracellular, vacuole	73.25	72.94
KRH53391	Soybean	extracellular, vacuole	73.25	72.94
VIT_18s0001g15550.t01	Wine grape	extracellular	72.19	72.81
PGSC0003DMT400063802	Potato	vacuole	74.1	72.56
AT5G42240.1	Thale cress	vacuole	71.76	71.46
KRH15957	Soybean	nucleus	73.04	70.64
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	70.7	70.25
GSMUA_Achr8P29460_001	Banana	vacuole	78.98	69.79
CDX80725	Canola	extracellular, vacuole	69.43	68.7
CDY48945	Canola	extracellular, vacuole	69.43	68.55
Bra034921.1-P	Field mustard	extracellular, vacuole	69.43	68.55
PGSC0003DMT400076556	Potato	extracellular, vacuole	69.21	68.2
Bra013152.1-P	Field mustard	vacuole	66.67	67.38
CDY70042	Canola	vacuole	63.69	66.82
CDX93108	Canola	vacuole	63.69	66.82
AT2G12480.3	Thale cress	vacuole	66.24	66.67
GSMUA_Achr6P29260_001	Banana	plasma membrane	66.88	66.6
AT1G43780.1	Thale cress	extracellular, vacuole	67.52	66.39
AT5G42230.2	Thale cress	extracellular, vacuole	65.61	65.88
CDX81435	Canola	cytosol	56.69	64.65
Bra040939.1-P	Field mustard	extracellular, vacuole	63.91	64.18
Bra037202.1-P	Field mustard	extracellular	63.69	63.97
CDY66771	Canola	cytosol	15.5	63.48
CDY66139	Canola	extracellular	65.39	63.37
CDY23340	Canola	vacuole	62.63	62.9
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	57.75	61.68
Bra022715.1-P	Field mustard	extracellular	52.23	61.35
Solyc10g054090.1.1	Tomato	extracellular	12.1	60.64
CDY37202	Canola	extracellular	57.54	59.43
TraesCS2B01G304000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.74	44.02
TraesCS6B01G205500.1	Wheat	vacuole	43.74	43.83

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004185
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058
PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560	PFscan:PS51257	PANTHER:PTHR11802
PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G106700	EnsemblPlants:TraesCS4B01G106700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:-:116212875..116216423

Molecular Weight (calculated)

52365.3 Da

IEP (calculated)

7.083

GRAVY (calculated)

-0.135

Length

471 amino acids

Sequence
(BLAST)

001: MAGSWRAAAL AVAMIAWVAS SCVLGFPEDL VGRLPGQPTV GFRQFAGYVD VDVKAGRSLF YYFAEAQDHA AGRPLTLWLN GGPGCSSVGG GAFTELGPFY
101: PRGDGRGLRL NKKSWNKVSN LLFVESPAGV GWSYSNTSSD YNTGDARTAN DMYKFLLGWY KKFPEYRSSS LLLSGESYAG HYIPQLTDVL LTHNEKSKGF
201: KFNIKGVAIG NPLLKLDRDV PATYEYFWSH GMISDEIFLA INKGCDFEDY TFGSPHNESK SCNDAIAEAN AIVGQYVNNY DVILDVCYPS IVMQELRLRK
301: YVTKISLGVD VCMSYERYFY FNLPEVQHAL HANRTHLPYG WGMCSDVLNY TDKDGNINIL PLLQRIVEHK IPVWIFSGDQ DSVVPLLGSR TLVRELAHDM
401: GLPVTVPYST WFRKGQVGGW TTEYGNLLTF ATVRGASHMV PFAQPDRALG LFRSFVLGQR LPNTTYPPIG D

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.