Factsheet for Bra040939.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23340	Canola	vacuole	97.23	97.23
Bra037202.1-P	Field mustard	extracellular	81.88	81.88
Bra022715.1-P	Field mustard	extracellular	68.44	80.05
Bra013152.1-P	Field mustard	vacuole	78.04	78.54
AT5G42240.1	Thale cress	vacuole	75.48	74.84
AT2G12480.3	Thale cress	vacuole	74.2	74.36
AT5G42230.2	Thale cress	extracellular, vacuole	71.22	71.22
PGSC0003DMT400076556	Potato	extracellular, vacuole	67.38	66.11
Bra034921.1-P	Field mustard	extracellular, vacuole	67.16	66.04
Os11t0213600-01	Rice	plasma membrane	65.46	66.02
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	65.88	65.19
Solyc01g104850.2.1	Tomato	extracellular, vacuole	66.31	65.06
TraesCS4A01G202600.1	Wheat	vacuole	64.82	64.41
TraesCS4D01G103600.1	Wheat	vacuole	64.39	63.98
TraesCS4B01G106700.1	Wheat	vacuole	64.18	63.91
TraesCS4B01G264700.1	Wheat	vacuole	63.97	63.69
TraesCS4D01G264700.1	Wheat	vacuole	63.75	63.48
Zm00001d004691_P001	Maize	vacuole	63.54	63.0
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	63.11	62.18
TraesCS4A01G043900.1	Wheat	vacuole	58.21	61.49
Zm00001d049055_P001	Maize	vacuole	63.97	60.48
GSMUA_Achr8P29460_001	Banana	vacuole	67.16	59.1
HORVU4Hr1G016730.17	Barley	plastid	65.03	58.21
GSMUA_Achr6P29260_001	Banana	plasma membrane	57.78	57.29
Bra032875.1-P	Field mustard	vacuole	42.86	44.27
Bra005488.1-P	Field mustard	endoplasmic reticulum, vacuole	42.86	43.51
Bra010903.1-P	Field mustard	vacuole	42.64	43.48

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EnsemblPlantsGene:Bra040939	EnsemblPlants:Bra040939.1
EnsemblPlants:Bra040939.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029058
UniProt:M4FIL0	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF20
InterPro:Peptidase_S10	MEROPS:S10.A33	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	UniParc:UPI000253EACC
SEG:seg	:	:	:	:	:

Description

AT5G42240 (E=9e-203) scpl42 | scpl42 (serine carboxypeptidase-like 42); serine-type carboxypeptidase

Coordinates

chrScaffold000320:-:14773..17063

Molecular Weight (calculated)

52609.9 Da

IEP (calculated)

6.832

GRAVY (calculated)

-0.113

Length

469 amino acids

Sequence
(BLAST)

001: MVSYGGLAVT MVVVVVTVQL LGCNFAEGYP EEELVVRLPG QPKVLFRQYA GYVEVDSKTG RSLFYYFVEA ATQPETKPLT LWLNGGPGCS SVGGGAFTEL
101: GPFYPTGDGR GLRINPMSWN KASNLLFVES PAGVGWSYSN TSSDYNTGDE TTAKDMLVFL MRWFSKFPEL KARDFFLTGE SYAGHYIPQL ADAILSYNRQ
201: SSGFKINVKG IAIGNPLLKL NTDTSAVYEY LWSHGIISDE LRLEIISQCD FNNIPNVSNA CIKAATEAGV VSQFIDVDDV LRDLCYPSIV QQELRLKKMA
301: THMSIGVDVC MTYERKFYFN LPEVQHALHA NRTRLPYEWS MCSTLVNYHG IDSNISMLPL LKRIIQNKTP VWIFSGDQDS IVPFLGTRTN IRELAHDLNF
401: STTLPYGHWF HKDQVGGWVT EYGKLLTFAT VRGAAHMVPY AQPARALHMF SCFVRGRRLP NNTHYPHDE

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.